RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ESCO2Q56NI9 601 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 WDR38Q5JTN6 314 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 FDX2Q6P4F2 183 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 WDR82Q6UXN9 313 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 C12orf54Q6X4T0 127 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 PRSS35Q8N3Z0 413 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 OR5A2Q8NGI9 324 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 ADI1Q9BV57 179 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 MYRFQ9Y2G1 1151 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 HSPE1-MOB4S4R3N1 261 aa13.84□□□□□ -0.19
CDT1-202ENST00000562747 A0A0G2JMP0 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 A0A0X1KG70 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OOEPA6NGQ2 149 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR5B21A6NL26 309 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 SYT7O43581 403 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 NDUFA2O43678 99 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 NRASP01111 189 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 CAPGP40121 348 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 PSMB10P40306 273 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 GNG3P63215 75 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 CSNK2BP67870 215 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 LCN2P80188 198 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 CEP78Q5JTW2 689 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 CLVS2Q5SYC1 327 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 TMEM42Q69YG0 159 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 KCTD8Q6ZWB6 473 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 NLRC3Q7RTR2 1065 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 SYS1Q8N2H4 156 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 BOLLQ8N9W6 283 aaKnown RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR4M2Q8NGB6 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR8B3Q8NGG8 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR52I1Q8NGK6 324 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR10Z1Q8NGY1 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR2G2Q8NGZ5 317 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 LRRC29Q8WV35 223 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 RNF166Q96A37 237 aaPredicted RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 NEIL1Q96FI4 390 aaPredicted RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 OR8B2Q96RD0 313 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 ALG8Q9BVK2 526 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 FGF23Q9GZV9 251 aaPredicted RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 METTL17Q9H7H0 456 aaPredicted RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 ERVK13-1Q9NX77 482 aa13.83□□□□□ -0.2
CDT1-202ENST00000562747 NKX1-2Q9UD57 310 aaPredicted RBP13.83□□□□□ -0.2
CDT1-202ENST00000562747 IRGMA1A4Y4 181 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 J3QLI3 93 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 J3QLW9 94 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 CDIPTO14735 213 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 HTR1AP08908 422 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 ZNF12P17014 697 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 ZNF19P17023 458 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 ZFP36P26651 326 aaKnown RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 CD80P33681 288 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 KIR3DL2P43630 455 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 GPM6AP51674 278 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 SEC61A1P61619 476 aaKnown RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 ODF4Q2M2E3 257 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 DCAF12L2Q5VW00 463 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 TEX36Q5VZQ5 186 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 PLCXD3Q63HM9 321 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 SFRP4Q6FHJ7 346 aaPredicted RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 FAHD2BQ6P2I3 314 aaPredicted RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 MOB3CQ70IA8 216 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 LHFPL3Q86UP9 236 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 TEX29Q8N6K0 151 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 SCCPDHQ8NBX0 429 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 C19orf18Q8NEA5 215 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 DEFB108BQ8NET1 73 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 CNIH3Q8TBE1 160 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 C10orf35Q96D05 121 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 FAHD2AQ96GK7 314 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 ZNF649Q9BS31 505 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 SSBP3Q9BWW4 388 aaPredicted RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 JAM3Q9BX67 310 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 PLEKHA1Q9HB21 404 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 FGF20Q9NP95 211 aaPredicted RBP13.82□□□□□ -0.2
CDT1-202ENST00000562747 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
CDT1-202ENST00000562747 SRRM5B3KS81 715 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 ZNF732B4DXR9 585 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 C3orf80F5H4A9 247 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 SPRY1O43609 319 aaPredicted RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 ISG15P05161 165 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 MUC1P15941 1255 aaPredicted RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 EGR1P18146 543 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 DCKP27707 260 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 CCR9P51686 369 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 GNB2P62879 340 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 HOXA4Q00056 320 aaPredicted RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 TMEM244Q5VVB8 128 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 C8orf59Q8N0T1 100 aaPredicted RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 HAVCR2Q8TDQ0 301 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 RPL3LQ92901 407 aaKnown RBP13.81□□□□□ -0.2
CDT1-202ENST00000562747 PELI1Q96FA3 418 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 OR51I2Q9H344 312 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms