RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HPNP05981 417 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 FABP1P07148 127 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 DLX2Q07687 328 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 MYBPHQ13203 477 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 KISS1Q15726 138 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 OPN5Q6U736 354 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 TMPRSS9Q7Z410 1059 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 RHBDD1Q8TEB9 315 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ISOC2Q96AB3 205 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF2Q9BSG1 426 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 C20orf24Q9BUV8 137 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 KLRF1Q9NZS2 232 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 NME2P1O60361 137 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SMIM6P0DI80 62 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF44P15621 663 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF41P51814 821 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 TGIF1Q15583 401 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 HMGN3Q15651 99 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SEMA6DQ8NFY4 1073 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 EIF5A2Q9GZV4 153 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SDHAF3Q9NRP4 125 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 KLHL13Q9P2N7 655 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 DEDDO75618 318 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 FOLR1P15328 257 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 OR1D5P58170 312 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 MIDNQ504T8 468 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 PGAM5Q96HS1 289 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 NIT2Q9NQR4 276 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 MT-ND4LP03901 98 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 DAOP14920 347 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 NME1P15531 152 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 GGNBP1Q5YKI7 109 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 Q6ZS52 159 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 FAM89BQ8N5H3 189 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 MESP1Q9BRJ9 268 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 EGLN1Q9GZT9 426 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 CHRNA10Q9GZZ6 450 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 C7orf77A4D0Y5 90 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 A6NLC8 198 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 EFNA2O43921 213 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 PAX6P26367 422 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 FAM3AP98173 230 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 FABP9Q0Z7S8 132 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 IP6K3Q96PC2 410 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 TPSD1Q9BZJ3 242 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 PPP4R1LQ9P1A2 415 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 AMDHD2Q9Y303 409 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1B0GX78 115 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 QDPRP09417 244 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 FCGR2AP12318 317 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 GABRR1P24046 479 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 GUK1Q16774 197 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 RNF212Q495C1 297 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 OR14K1Q8NGZ2 314 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 ERGIC1Q969X5 290 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 NKX2-4Q9H2Z4 354 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 PISDQ9UG56 409 aa12.28□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1W2PPE3 182 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1W2PPH5 198 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 C5orf63A6NC05 138 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 SERPINE3A8MV23 424 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 UBE2CO00762 179 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 FOSL2P15408 326 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 CAMLGP49069 296 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 PLEKHJ1Q9NW61 149 aa12.27□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 PRH1P02810 166 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 SNCAP37840 140 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 HGFACQ04756 655 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 SHDQ96IW2 340 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms