RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GATAD2BQ8WXI9 593 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 LHX4Q969G2 390 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 PPP1R14AQ96A00 147 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 RAB3IPQ96QF0 476 aaPredicted RBP8.49□□□□□ -1.05
CLK3-205ENST00000561673 PBOV1Q9GZY1 135 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 UNKLQ9H9P5 680 aaKnown RBP8.49□□□□□ -1.05
CLK3-205ENST00000561673 NOX4Q9NPH5 578 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 TNFRSF19Q9NS68 423 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 KRT84Q9NSB2 600 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 SNTG1Q9NSN8 517 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 MEGF8Q7Z7M0 2845 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ZNF816-ZNF321PA0A0X1KG74 233 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ZNF732B4DXR9 585 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
CLK3-205ENST00000561673 NDUFB3O43676 98 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ZNF254O75437 659 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 RHBDL1O75783 438 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 TFF1P04155 84 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 SELLP14151 372 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 OMGP23515 440 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 MAP2K3P46734 347 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 IL13RA1P78552 427 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 RIPPLY1Q0D2K3 151 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 CEACAM21Q3KPI0 293 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 CDONQ4KMG0 1287 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 DMRTC1Q5HYR2 192 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 LCN1P1Q5VSP4 162 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 AADACL4Q5VUY2 407 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 KDM4DQ6B0I6 523 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 SHISA2Q6UWI4 295 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 AMIGO2Q86SJ2 522 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 PDZD9Q8IXQ8 264 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 TCEANCQ8N8B7 351 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ASB17Q8WXJ9 295 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 TMIGD2Q96BF3 282 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 HIST1H2AAQ96QV6 131 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 OR8B4Q96RC9 309 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 CNN2Q99439 309 aaKnown RBP8.48□□□□□ -1.05
CLK3-205ENST00000561673 TTTY10Q9BZA0 68 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 OR51I2Q9H344 312 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 GPR84Q9NQS5 396 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ACOXLQ9NUZ1 547 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 DNAJB11Q9UBS4 358 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 AP4S1Q9Y587 144 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 KPTNQ9Y664 436 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 TMEM14AQ9Y6G1 99 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 DOCK11Q5JSL3 2073 aa8.48□□□□□ -1.05
CLK3-205ENST00000561673 ZAR1LA6NP61 321 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 SPRY1O43609 319 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 SRSF10O75494 262 aaKnown RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 IGLV3-1P01715 115 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 MELTFP08582 738 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 MDKP21741 143 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 FASP25445 335 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 RASSF2P50749 326 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 RIDAP52758 137 aaKnown RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 CXCR4P61073 352 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 GNG3P63215 75 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 MFGE8Q08431 387 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 DGUOKQ16854 277 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 ZNF829Q3KNS6 432 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 LRRC10Q5BKY1 277 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 SLX4IPQ5VYV7 408 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 NXNL2Q5VZ03 156 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 C12orf73Q69YU5 71 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 FIP1L1Q6UN15 594 aaKnown RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 ZNF788Q6ZQV5 615 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 MOB3CQ70IA8 216 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 COMMD2Q86X83 199 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 ZDHHC13Q8IUH4 622 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 SLC35F2Q8IXU6 374 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 OR5A2Q8NGI9 324 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 TMEM163Q8TC26 289 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 LRTOMTQ8WZ04 291 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 ITFG2Q969R8 447 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 MED30Q96HR3 178 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 FAM71F1Q96KD3 344 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 GAFA1Q96PS6 74 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 IL4I1Q96RQ9 567 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 APOL4Q9BPW4 351 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 DCTN5Q9BTE1 182 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 PRRG3Q9BZD7 231 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 CHIAQ9BZP6 476 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 DNTTIP1Q9H147 329 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 ADGRL4Q9HBW9 690 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 H2AFY2Q9P0M6 372 aaPredicted RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 ONECUT1Q9UBC0 465 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 NUFIP1Q9UHK0 495 aaKnown RBP8.47□□□□□ -1.05
CLK3-205ENST00000561673 IKZF2Q9UKS7 526 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 PIGLQ9Y2B2 252 aa8.47□□□□□ -1.05
CLK3-205ENST00000561673 A0A0U1RQK1 487 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 A0A1B0GVI7 797 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 OR2AT4A6NND4 320 aa8.46□□□□□ -1.06
CLK3-205ENST00000561673 SIGLEC5O15389 551 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms