RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ING4Q9UNL4 249 aa8.85□□□□□ -0.99
USP3-219ENST00000561326 MRPS28Q9Y2Q9 187 aaKnown RBP8.85□□□□□ -0.99
USP3-219ENST00000561326 A0A0B4J203 849 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 TUBAL3A6NHL2 446 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 OR5B21A6NL26 309 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 TIMM8AO60220 97 aaPredicted RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 ZNF780AO75290 641 aaPredicted RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 SCGNO76038 276 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 CLDN14O95500 239 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 CYB5AP00167 134 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 EIF4EP06730 217 aaKnown RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 THBDP07204 575 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 KITLGP21583 273 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 ALDH3B1P43353 468 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 NR4A2P43354 598 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 PITPNBP48739 271 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 PRSS12P56730 875 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 MZT1Q08AG7 82 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 CHD3Q12873 2000 aaKnown RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 PSG7Q13046 419 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 IL18Q14116 193 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 PYDC2Q56P42 97 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 SLC22A25Q6T423 547 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 GLIPR1L1Q6UWM5 242 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 MKXQ8IYA7 352 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 CMTM4Q8IZR5 234 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 MFSD4AQ8N468 514 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 GDPD1Q8N9F7 314 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 SPERTQ8NA61 448 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 BHLHE23Q8NDY6 225 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 OR8G5Q8NG78 346 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 OR4D6Q8NGJ1 314 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 OR13G1Q8NGZ3 307 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 OR8S1Q8NH09 359 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 UBASH3BQ8TF42 649 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 TNFAIP8L1Q8WVP5 186 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 RNF170Q96K19 258 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 SPACA5Q96QH8 159 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 CST11Q9H112 138 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 ELL3Q9HB65 397 aaPredicted RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 RHBDL2Q9NX52 303 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 EXTL2Q9UBQ6 330 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 GPR160Q9UJ42 338 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 PURGQ9UJV8 347 aaKnown RBP8.84□□□□□ -0.99
USP3-219ENST00000561326 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
USP3-219ENST00000561326 A0A0A6YYH2 397 aa8.83□□□□□ -1
USP3-219ENST00000561326 TMEM272A0A1B0GTI8 110 aa8.83□□□□□ -1
USP3-219ENST00000561326 PLSCR5A0PG75 271 aa8.83□□□□□ -1
USP3-219ENST00000561326 DPRXA6NFQ7 191 aa8.83□□□□□ -1
USP3-219ENST00000561326 A6NJ64 397 aa8.83□□□□□ -1
USP3-219ENST00000561326 ZNF732B4DXR9 585 aa8.83□□□□□ -1
USP3-219ENST00000561326 ATP6V1G2-DDX39BF2Z307 99 aa8.83□□□□□ -1
USP3-219ENST00000561326 ABCD4O14678 606 aa8.83□□□□□ -1
USP3-219ENST00000561326 KDM4BO94953 1096 aa8.83□□□□□ -1
USP3-219ENST00000561326 CSTBP04080 98 aaKnown RBP8.83□□□□□ -1
USP3-219ENST00000561326 NAT2P11245 290 aa8.83□□□□□ -1
USP3-219ENST00000561326 ZNF250P15622 560 aa8.83□□□□□ -1
USP3-219ENST00000561326 CA6P23280 308 aa8.83□□□□□ -1
USP3-219ENST00000561326 UQCRFS1P47985 274 aa8.83□□□□□ -1
USP3-219ENST00000561326 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
USP3-219ENST00000561326 ERVS71-1P61550 626 aa8.83□□□□□ -1
USP3-219ENST00000561326 GNG3P63215 75 aa8.83□□□□□ -1
USP3-219ENST00000561326 NKX6-1P78426 367 aaPredicted RBP8.83□□□□□ -1
USP3-219ENST00000561326 BSPH1Q075Z2 132 aa8.83□□□□□ -1
USP3-219ENST00000561326 RSU1Q15404 277 aa8.83□□□□□ -1
USP3-219ENST00000561326 OR8G1Q15617 311 aa8.83□□□□□ -1
USP3-219ENST00000561326 RAB12Q6IQ22 244 aa8.83□□□□□ -1
USP3-219ENST00000561326 PYHIN1Q6K0P9 492 aa8.83□□□□□ -1
USP3-219ENST00000561326 C22orf34Q6ZV56 151 aa8.83□□□□□ -1
USP3-219ENST00000561326 CDH24Q86UP0 819 aa8.83□□□□□ -1
USP3-219ENST00000561326 ZNF573Q86YE8 665 aa8.83□□□□□ -1
USP3-219ENST00000561326 ZSCAN4Q8NAM6 433 aaPredicted RBP8.83□□□□□ -1
USP3-219ENST00000561326 NUP37Q8NFH4 326 aa8.83□□□□□ -1
USP3-219ENST00000561326 OR4M1Q8NGD0 313 aa8.83□□□□□ -1
USP3-219ENST00000561326 SSC4DQ8WTU2 575 aa8.83□□□□□ -1
USP3-219ENST00000561326 OR5P3Q8WZ94 311 aa8.83□□□□□ -1
USP3-219ENST00000561326 RFT1Q96AA3 541 aa8.83□□□□□ -1
USP3-219ENST00000561326 SOSTQ9BQB4 213 aa8.83□□□□□ -1
USP3-219ENST00000561326 URM1Q9BTM9 101 aaKnown RBP8.83□□□□□ -1
USP3-219ENST00000561326 CCDC32Q9BV29 185 aa8.83□□□□□ -1
USP3-219ENST00000561326 RTL8AQ9BWD3 113 aa8.83□□□□□ -1
USP3-219ENST00000561326 METTL9Q9H1A3 318 aa8.83□□□□□ -1
USP3-219ENST00000561326 ATG5Q9H1Y0 275 aa8.83□□□□□ -1
USP3-219ENST00000561326 C14orf119Q9NWQ9 140 aa8.83□□□□□ -1
USP3-219ENST00000561326 DUSP13Q9UII6 198 aa8.83□□□□□ -1
USP3-219ENST00000561326 POU2F3Q9UKI9 436 aa8.83□□□□□ -1
USP3-219ENST00000561326 PQLC2LA1A4F0 135 aa8.82□□□□□ -1
USP3-219ENST00000561326 J3QRK9 145 aa8.82□□□□□ -1
USP3-219ENST00000561326 ZG16O60844 167 aa8.82□□□□□ -1
USP3-219ENST00000561326 IGHV3-13P01766 116 aa8.82□□□□□ -1
USP3-219ENST00000561326 CD3EP07766 207 aa8.82□□□□□ -1
USP3-219ENST00000561326 MPV17P39210 176 aa8.82□□□□□ -1
USP3-219ENST00000561326 OR3A4PP47883 348 aa8.82□□□□□ -1
USP3-219ENST00000561326 GPM6AP51674 278 aa8.82□□□□□ -1
USP3-219ENST00000561326 PDZK1IP1Q13113 114 aa8.82□□□□□ -1
USP3-219ENST00000561326 ZNF181Q2M3W8 571 aa8.82□□□□□ -1
USP3-219ENST00000561326 SLC22A6Q4U2R8 563 aa8.82□□□□□ -1
USP3-219ENST00000561326 BEX5Q5H9J7 111 aa8.82□□□□□ -1
USP3-219ENST00000561326 DMRTC1Q5HYR2 192 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms