RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 GGHQ92820 318 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 MICU1Q9BPX6 476 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 TMPRSS13Q9BYE2 586 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 OR51I2Q9H344 312 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 CLEC2DQ9UHP7 191 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
TPM1-230ENST00000561266 LOC107986453A0A1B0GWG9 222 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 hCG_1807616A0A1W2PRN6 198 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 OR4C45A6NMZ5 311 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 ZNF732B4DXR9 585 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 H0YAE9 185 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 LGALS8O00214 317 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 FSTL3O95633 263 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 NRASP01111 189 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 GYPAP02724 150 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 ATP6V1B1P15313 513 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 GMFBP60983 142 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 PAX2Q02962 417 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 UBE2V2Q15819 145 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 CEACAM21Q3KPI0 293 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 OR2G6Q5TZ20 316 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 DOK3Q7L591 496 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 THAP5Q7Z6K1 395 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 GLCCI1Q86VQ1 547 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 C1orf87Q8N0U7 546 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 KLHL36Q8N4N3 616 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 SPICQ8N5J4 248 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 ADAT3Q96EY9 351 aaPredicted RBP11.59□□□□□ -0.55
TPM1-230ENST00000561266 RTL8AQ9BWD3 113 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 OPN4Q9UHM6 478 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 ENPP5Q9UJA9 477 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
TPM1-230ENST00000561266 SIRT4Q9Y6E7 314 aaPredicted RBP11.59□□□□□ -0.55
TPM1-230ENST00000561266 IGKV1-27A0A075B6S5 117 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 OOEPA6NGQ2 149 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 ANXA2P2A6NMY6 339 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 AKR7A2O43488 359 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 SYT7O43581 403 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 FADS2O95864 444 aaKnown RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 LALBAP00709 142 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 HTR1AP08908 422 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 IRF2P14316 349 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 RPS2P15880 293 aaKnown RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 CFHR2P36980 270 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 CHRFAM7AQ494W8 412 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 KLHL22Q53GT1 634 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 CLVS2Q5SYC1 327 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 ZBTB37Q5TC79 503 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 TEX36Q5VZQ5 186 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 PLCXD3Q63HM9 321 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 KCTD8Q6ZWB6 473 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 FAM220AQ7Z4H9 259 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 KCTD20Q7Z5Y7 419 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 SYS1Q8N2H4 156 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 MUC20Q8N307 709 aaPredicted RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 OR5T2Q8NGG2 359 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 OR5A2Q8NGI9 324 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 SGCDQ92629 289 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 DACT3Q96B18 629 aaPredicted RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 FAHD2AQ96GK7 314 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 ZNF488Q96MN9 340 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 JAM3Q9BX67 310 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 SHARPINQ9H0F6 387 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 SMURF1Q9HCE7 757 aa11.58□□□□□ -0.56
TPM1-230ENST00000561266 POLR3KQ9Y2Y1 108 aaPredicted RBP11.58□□□□□ -0.56
TPM1-230ENST00000561266 LOC105371242A0A075B767 164 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 IGKV1-9A0A0C4DH69 117 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 A0A1B0GVI7 797 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 PQLC2LA1A4F0 135 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 TMEM210A6NLX4 147 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 A8MXK9 166 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 SRRM5B3KS81 715 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 SYNGR1O43759 233 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 MTRF1O75570 445 aaKnown RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 SELLP14151 372 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 GNG3P63215 75 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 MZT1Q08AG7 82 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 IL18R1Q13478 541 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 ALKBH1Q13686 389 aaKnown RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 DCDC5Q6ZRR9 648 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 C8orf59Q8N0T1 100 aaPredicted RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 BATF2Q8N1L9 274 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 SETD9Q8NE22 299 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 TRMT10AQ8TBZ6 339 aaKnown RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 NPRL2Q8WTW4 380 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 AQP3Q92482 292 aa11.57□□□□□ -0.56
TPM1-230ENST00000561266 RGP1Q92546 391 aaPredicted RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 NEIL1Q96FI4 390 aaPredicted RBP11.57□□□□□ -0.56
TPM1-230ENST00000561266 BEX2Q9BXY8 128 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms