RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TEX12Q9BXU0 123 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 DPAGT1Q9H3H5 408 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 SIRT7Q9NRC8 400 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 LAMP5Q9UJQ1 280 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 NKX6-3A6NJ46 265 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 ACOD1A6NK06 481 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 RNASEK-C17orf49H0YIS7 233 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 GPM6AP51674 278 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 OCLNQ16625 522 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 DGUOKQ16854 277 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 H1FXQ92522 213 aaKnown RBP13.32□□□□□ -0.28
SNX1-213ENST00000561026 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 GAFA1Q96PS6 74 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 TEAD3Q99594 435 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 YIPF3Q9GZM5 350 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 OR51I2Q9H344 312 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 YY1AP1Q9H869 796 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 SLC25A19Q9HC21 320 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 FAM206AQ9NX38 181 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 SLC25A10Q9UBX3 287 aaPredicted RBP13.32□□□□□ -0.28
SNX1-213ENST00000561026 CAB39Q9Y376 341 aaPredicted RBP13.32□□□□□ -0.28
SNX1-213ENST00000561026 WNK1Q9H4A3 2382 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 VWFP04275 2813 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 TMEM269A0A1B0GVZ9 245 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 OR2AT4A6NND4 320 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 SIGLEC5O15389 551 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 RHBDL1O75783 438 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 TFF1P04155 84 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 ACAA1P09110 424 aaPredicted RBP13.31□□□□□ -0.28
SNX1-213ENST00000561026 FBP1P09467 338 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 EEF1B2P24534 225 aaKnown RBP13.31□□□□□ -0.28
SNX1-213ENST00000561026 MAP2K3P46734 347 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 GNG3P63215 75 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 CBX1P83916 185 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 PRB3Q04118 309 aaPredicted RBP13.31□□□□□ -0.28
SNX1-213ENST00000561026 APOFQ13790 326 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 FLOT2Q14254 428 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 CEACAM21Q3KPI0 293 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 KCTD18Q6PI47 426 aaPredicted RBP13.31□□□□□ -0.28
SNX1-213ENST00000561026 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 C1orf122Q6ZSJ8 110 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 SPATA24Q86W54 205 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 TNFRSF14Q92956 283 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 MROQ9BYG7 248 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 NLKQ9UBE8 527 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 RNF114Q9Y508 228 aa13.31□□□□□ -0.28
SNX1-213ENST00000561026 ZNF732B4DXR9 585 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 PSMD9O00233 223 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 NPFFO15130 113 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 FKBP6O75344 327 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 GLRA1P23415 457 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 DLX1P56177 255 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 CAV3P56539 151 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 ROM1Q03395 351 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 SNAPC1Q16533 368 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 TAF9Q16594 264 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 GDPGP1Q6ZNW5 385 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 ZSCAN4Q8NAM6 433 aaPredicted RBP13.3□□□□□ -0.28
SNX1-213ENST00000561026 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
SNX1-213ENST00000561026 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
SNX1-213ENST00000561026 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 TCRBV3S1A0A5B6 114 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 CCDC182A6NF36 153 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 M0R1W7 72 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 GYG2O15488 501 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 ZNF254O75437 659 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 ATP6V1B1P15313 513 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 NDUFB7P17568 137 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 CRISP1P54107 249 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 PROK1P58294 105 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 DEFA6Q01524 100 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 DNAL1Q4LDG9 190 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 ZNF679Q8IYX0 411 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 OR5A2Q8NGI9 324 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 ZNF671Q8TAW3 534 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 OR51E1Q8TCB6 317 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 ASB17Q8WXJ9 295 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 DNAJC9Q8WXX5 260 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 NRBF2Q96F24 287 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 PBOV1Q9GZY1 135 aa13.29□□□□□ -0.28
SNX1-213ENST00000561026 METTL8Q9H825 291 aaKnown RBP13.29□□□□□ -0.28
SNX1-213ENST00000561026 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
SNX1-213ENST00000561026 NOTCH1P46531 2555 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 BTBD17A6NE02 478 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms