RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 STARD5Q9NSY2 213 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 OCIAD1Q9NX40 245 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 GFOD1Q9NXC2 390 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 TAS2R4Q9NYW5 299 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 TREM2Q9NZC2 230 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 OR52A1Q9UKL2 312 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 RARRES3Q9UL19 164 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 ZNF346Q9UL40 294 aaKnown RBP7.59□□□□□ -1.19
CCDC33-209ENST00000560565 GPR132Q9UNW8 380 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 KCNIP3Q9Y2W7 256 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 MPDZO75970 2070 aa7.59□□□□□ -1.19
CCDC33-209ENST00000560565 IGKV1D-42A0A075B6H8 117 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 A0A087WWC5 75 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 LOC107986453A0A1B0GWG9 222 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 A0A1W2PS29 197 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FRG2CA6NGY1 282 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 OR6C76A6NM76 312 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SERPINE3A8MV23 424 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 A8MVM7 634 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 IDSB3KWA1 339 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 B4DEV8 164 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 B4E171 279 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 C9orf172C9J069 976 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 E5RGE8 158 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SYT7O43581 403 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 IFNA2P01563 188 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FCGR3AP08637 254 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FGF5P12034 268 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 PTHLHP12272 177 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FOLR1P15328 257 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 MUC1P15941 1255 aaPredicted RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF28P17035 718 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 PTNP21246 168 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 LAP3P28838 519 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 HRH1P35367 487 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 GNALP38405 381 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 TSPAN7P41732 249 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 POLR2HP52434 150 aaKnown RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 TMPRSS3P57727 454 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SNRPNP63162 240 aaKnown RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SRPXP78539 464 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF117Q03924 483 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FABP9Q0Z7S8 132 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 CLN3Q13286 438 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 MELKQ14680 651 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 RSU1Q15404 277 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 DCAF12Q5T6F0 453 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 PPP1R3BQ86XI6 285 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SGPP2Q8IWX5 399 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 PLPP7Q8NBV4 271 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 OR10H5Q8NGA6 315 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 OR4A4PQ8NGN8 299 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FNDC9Q8TBE3 224 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 STT3BQ8TCJ2 826 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 TMEM234Q8WY98 164 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 HIST1H2BAQ96A08 127 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 CPNE4Q96A23 557 aaPredicted RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SGK3Q96BR1 496 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 DDA1Q9BW61 102 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SELENOIQ9C0D9 397 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 SLC35B3Q9H1N7 401 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 FOXJ2Q9P0K8 574 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 MIOXQ9UGB7 285 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF230Q9UIE0 474 aaPredicted RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 DTX4Q9Y2E6 619 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 NSG2Q9Y328 171 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 STARD10Q9Y365 291 aa7.58□□□□□ -1.2
CCDC33-209ENST00000560565 PRRC2CQ9Y520 2896 aaKnown RBP7.58□□□□□ -1.2
CCDC33-209ENST00000560565 IGLV3-12A0A075B6K2 115 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 TRAV20A0A0B4J274 112 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 MEIS3P1A6NDR6 274 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 TMEM235A6NFC5 223 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 SEC14L6B5MCN3 397 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 TSTD3H0UI37 97 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 STMND1H3BQB6 276 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 M0R036 132 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 PSMD9O00233 223 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 AHSA1O95433 338 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 IGHV2-5P01817 119 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 CTSBP07858 339 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 H2BFMP0C1H6 154 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 LIPCP11150 499 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 FBLP22087 321 aaKnown RBP7.57□□□□□ -1.2
CCDC33-209ENST00000560565 RPL12P30050 165 aaKnown RBP7.57□□□□□ -1.2
CCDC33-209ENST00000560565 CD80P33681 288 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 HAAOP46952 286 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 CCR4P51679 360 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF133P52736 654 aaPredicted RBP7.57□□□□□ -1.2
CCDC33-209ENST00000560565 UCP2P55851 309 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 SKP2Q13309 424 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF266Q14584 549 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 KCNAB1Q14722 419 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 TGIF1Q15583 401 aa7.57□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF239Q16600 458 aaKnown RBP7.57□□□□□ -1.2
CCDC33-209ENST00000560565 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms