RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 hCG_1807616A0A1W2PRN6 198 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ANKRD61A6NGH8 418 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 LRRC30A6NM36 301 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ZNF732B4DXR9 585 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 RGS10O43665 173 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 IGHV2-70P01814 119 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 IRF2P14316 349 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ZNF12P17014 697 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 CDH15P55291 814 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 WNT4P56705 351 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 BTG1P62324 171 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 KRTAP1-1Q07627 177 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ZMYND11Q15326 602 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 RBM48Q5RL73 367 aaKnown RBP13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 LURAP1LQ8IV03 231 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 C19orf18Q8NEA5 215 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 CCDC54Q8NEL0 328 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 OR13C3Q8NGS6 347 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 RPS4Y2Q8TD47 263 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 HPS1Q92902 700 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 FGGYQ96C11 551 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 CDCA4Q9BXL8 241 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 CCDC90BQ9GZT6 254 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 COMMD4Q9H0A8 199 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 METTL17Q9H7H0 456 aaPredicted RBP13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
LYSMD2-204ENST00000560491 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 TMEM210A6NLX4 147 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 CDIPTO14735 213 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 OGG1O15527 345 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 LY6G6DO95868 133 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 ZNF20P17024 532 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 EGR1P18146 543 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 CD80P33681 288 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 GNG3P63215 75 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 IRF3Q14653 427 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 UBE2V2Q15819 145 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 RNLSQ5VYX0 342 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 BIVMQ86UB2 503 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 OR5A2Q8NGI9 324 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 OR13C5Q8NGS8 318 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 NPRL2Q8WTW4 380 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 TSEN15Q8WW01 171 aaKnown RBP13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 OR5M11Q96RB7 305 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 MND1Q9BWT6 205 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 CHST5Q9GZS9 411 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 TLNRD1Q9H1K6 362 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 RASSF4Q9H2L5 321 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 RNF7Q9UBF6 113 aa13.03□□□□□ -0.32
LYSMD2-204ENST00000560491 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 C3orf80F5H4A9 247 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 DMKNQ6E0U4 476 aaPredicted RBP13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 SCCPDHQ8NBX0 429 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 TRMT10AQ8TBZ6 339 aaKnown RBP13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 LRRC29Q8WV35 223 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 OR51I2Q9H344 312 aa13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 LSM2Q9Y333 95 aaKnown RBP13.02□□□□□ -0.33
LYSMD2-204ENST00000560491 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 FAM230AA0A1W2PPH8 454 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PQLC2LA1A4F0 135 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 RHBDL1O75783 438 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 GATBO75879 557 aaKnown RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 ZNF16P17020 682 aaPredicted RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 EEF1B2P24534 225 aaKnown RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 MAP2K4P45985 399 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 SOX2P48431 317 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 GMFBP60983 142 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 LMO4P61968 165 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 MED22Q15528 200 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 FAM76BQ5HYJ3 339 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 LCE2DQ5TA82 110 aaPredicted RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 SFRP4Q6FHJ7 346 aaPredicted RBP13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 CLEC9AQ6UXN8 241 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PRSS48Q7RTY5 328 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 GHSRQ92847 366 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 C10orf35Q96D05 121 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PGLYRP3Q96LB9 341 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 ZNF665Q9H7R5 613 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 DHDHQ9UQ10 334 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
LYSMD2-204ENST00000560491 ANK3Q12955 4377 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms