RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 TMEM179BQ7Z7N9 219 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 MKXQ8IYA7 352 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 OR6V1Q8N148 313 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 DYNAPQ8N1N2 210 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 OR9Q2Q8NGE9 314 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 OR8S1Q8NH09 359 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 UTP4Q969X6 686 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 RSRC1Q96IZ7 334 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 MAP6Q96JE9 813 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 RAB3IPQ96QF0 476 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 WDR13Q9H1Z4 485 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 POMPQ9Y244 141 aa10.31□□□□□ -0.76
RABGGTA-213ENST00000560127 TCRBV3S1A0A5B6 114 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 NKX6-3A6NJ46 265 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 CDIPTO14735 213 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 SYNGR1O43759 233 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 DNAJC8O75937 253 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 GADD45GO95257 159 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 POU1F1P28069 291 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 OTX1P32242 354 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 NAA10P41227 235 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 VDAC2P45880 294 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 HMGA2P52926 109 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 DCTN2Q13561 401 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 KLHL22Q53GT1 634 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 NKAPLQ5M9Q1 402 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 DNM1P34Q6PK57 102 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 CCDC121Q6ZUS5 278 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 LHFPL4Q7Z7J7 247 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 OR2AJ1Q8NGZ0 328 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 ANGPTL6Q8NI99 470 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 CANT1Q8WVQ1 401 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 SPTSSAQ969W0 71 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 MED30Q96HR3 178 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 TLNRD1Q9H1K6 362 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 PPP1R3EQ9H7J1 279 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 SRA1Q9HD15 236 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 TMEM5Q9Y2B1 443 aa10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 FAM32AQ9Y421 112 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-213ENST00000560127 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 AQP12BA6NM10 295 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 ANKRD30BLA7E2S9 258 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 SIGLEC5O15389 551 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 ACAA1P09110 424 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 PAICSP22234 425 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 DPY19L2P2Q6ZN68 376 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 AQP12AQ8IXF9 295 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 C11orf42Q8N5U0 333 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 OR8D4Q8NGM9 314 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 DPF1Q92782 380 aa10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 MRPL22Q9NWU5 206 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-213ENST00000560127 DHRS12A0PJE2 317 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 UNC119BA6NIH7 251 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 FAM90A8PA6NJQ4 464 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 TIPRLO75663 272 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 CHRM2P08172 466 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 SLC2A1P11166 492 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 COX7A1P24310 79 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 RPS6KA3P51812 740 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 LGALS4P56470 323 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 ERVFRD-1P60508 538 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 DOC2BQ14184 412 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 SLC36A3Q495N2 470 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 OR2T5Q6IEZ7 315 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 DRAM2Q6UX65 266 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 ASRGL1Q7L266 308 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 ZBTB46Q86UZ6 589 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 FAM185AQ8N0U4 392 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 OR10Z1Q8NGY1 313 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 OR2T29Q8NH02 315 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 MYDGFQ969H8 173 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 SPSB4Q96A44 273 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 MCUR1Q96AQ8 359 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 NMNAT3Q96T66 252 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 CHID1Q9BWS9 393 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 GPR61Q9BZJ8 451 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 C19orf12Q9NSK7 152 aa10.28□□□□□ -0.76
RABGGTA-213ENST00000560127 LCE6AA0A183 80 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 TNFRSF11BO00300 401 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 AKR7A2O43488 359 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 GLCEO94923 617 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 ALDOBP05062 364 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 CCDC159P0C7I6 412 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 RAP2AP10114 183 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 PSKH1P11801 424 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 LMO1P25800 156 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 DDOSTP39656 456 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 FAM3AP98173 230 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 FLOT2Q14254 428 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 DMRTC1Q5HYR2 192 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 LDLRAD2Q5SZI1 272 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 SLC16A9Q7RTY1 509 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms