RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RHBDL1O75783 438 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 FSTL3O95633 263 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 CLIC3O95833 236 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 EPHA1P21709 976 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 PEX2P28328 305 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 KIR3DL2P43630 455 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF91Q05481 1191 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 WDR38Q5JTN6 314 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 SLC25A30Q5SVS4 291 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 APH1BQ8WW43 257 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 CCL13Q99616 98 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 ENPP5Q9UJA9 477 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 POLR3KQ9Y2Y1 108 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 V9GYS6 101 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 PPIAL4CA0A0B4J2A2 164 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 IGHV2-70DA0A0C4DH43 119 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 DAPL1A0PJW8 107 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 TMEM210A6NLX4 147 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 C22orf46C9J442 243 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 DBTP11182 482 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 GATA3P23771 443 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 OR12D2P58182 307 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 SMN1Q16637 294 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 MEDAGQ5VYS4 303 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 FAM220AQ7Z4H9 259 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 RDH10Q8IZV5 341 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 BATF2Q8N1L9 274 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 FAM216BQ8N7L0 139 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 NANPQ8TBE9 248 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF488Q96MN9 340 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 SMPD3Q9NY59 655 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 EXOGQ9Y2C4 368 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 MYRFQ9Y2G1 1151 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 SOX21Q9Y651 276 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 AUP1Q9Y679 476 aa12.34□□□□□ -0.43
RABGGTA-211ENST00000559850 A0A1B0GVI7 797 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 SRRM5B3KS81 715 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 J3QLW9 94 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 TMPRSS2O15393 492 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 TCF21O43680 179 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 MTRF1O75570 445 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 SULT1C4O75897 302 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 VENTXO95231 258 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 NRASP01111 189 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 FSHBP01225 129 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 SELLP14151 372 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ATP6V1B1P15313 513 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ZNF19P17023 458 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 AMY2BP19961 511 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ISL1P61371 349 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ACTC1P68032 377 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ACTA1P68133 377 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 CEACAM21Q3KPI0 293 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 CDONQ4KMG0 1287 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ARMCX4Q5H9R4 360 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 DOK3Q7L591 496 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 LHFPL3Q86UP9 236 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ZNF555Q8NEP9 628 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 NPRL2Q8WTW4 380 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 RAB40AQ8WXH6 277 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 DACT3Q96B18 629 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 SLC6A7Q99884 636 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 MRI1Q9BV20 369 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ABCB9Q9NP78 766 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ERVK-18Q9QC07 812 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 ATRQ13535 2644 aa12.33□□□□□ -0.44
RABGGTA-211ENST00000559850 DVL1O14640 695 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 SLC16A6O15403 523 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 SYT7O43581 403 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 CCL1P22362 96 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 NANOS3P60323 173 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 GNG3P63215 75 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 PAX8Q06710 450 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 MICBQ29980 383 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 FAM76BQ5HYJ3 339 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 CLVS2Q5SYC1 327 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 HAGHLQ6PII5 290 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 BTNL3Q6UXE8 466 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 OR5A2Q8NGI9 324 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 CYGBQ8WWM9 190 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 ST8SIA4Q92187 359 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 C4orf36Q96KX1 117 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 ISG20L2Q9H9L3 353 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 TRIM36Q9NQ86 728 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 DNAJB11Q9UBS4 358 aa12.32□□□□□ -0.44
RABGGTA-211ENST00000559850 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
RABGGTA-211ENST00000559850 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms