RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 MICAQ29983 383 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 LRRC75BQ2VPJ9 315 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 LINC01590Q5TEZ4 76 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF770Q6IQ21 691 aaPredicted RBP7.49□□□□□ -1.21
HDDC3-204ENST00000559834 C16orf89Q6UX73 402 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF454Q8N9F8 522 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 AQP11Q8NBQ7 271 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 OR8D4Q8NGM9 314 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 THEM6Q8WUY1 208 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 RPL3LQ92901 407 aaKnown RBP7.49□□□□□ -1.21
HDDC3-204ENST00000559834 OTULINQ96BN8 352 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 CLPTM1LQ96KA5 538 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 GAFA1Q96PS6 74 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 NPFFR1Q9GZQ6 430 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 WDR13Q9H1Z4 485 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 RANBP3Q9H6Z4 567 aaPredicted RBP7.49□□□□□ -1.21
HDDC3-204ENST00000559834 PPP1R3EQ9H7J1 279 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 NIPAL2Q9H841 368 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 HEXA-AS1Q9H8Q6 139 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 CMC2Q9NRP2 79 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF319Q9P2F9 582 aa7.49□□□□□ -1.21
HDDC3-204ENST00000559834 G3V4G9 280 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 ANGPTL7O43827 346 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 XPNPEP2O43895 674 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 ALX3O95076 343 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 LYNP07948 512 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 SELLP14151 372 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 EFNB2P52799 333 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 DLX1P56177 255 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 LGALS4P56470 323 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 MXRA7P84157 204 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 LY6EQ16553 131 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 KLHL12Q53G59 568 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 KPRPQ5T749 579 aaPredicted RBP7.48□□□□□ -1.21
HDDC3-204ENST00000559834 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
HDDC3-204ENST00000559834 LIAT1Q6ZQX7 453 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 ZDHHC23Q8IYP9 409 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 PNKDQ8N490 385 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 TMEM185AQ8NFB2 350 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 OR4Q3Q8NH05 313 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 FAM81AQ8TBF8 368 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 TEX47Q8TBZ9 253 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 CFHR4Q92496 578 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 DGCR6LQ9BY27 220 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 OR51V1Q9H2C8 321 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 REEP1Q9H902 201 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 MED4Q9NPJ6 270 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 ARMC1Q9NVT9 282 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 RASL12Q9NYN1 266 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 TAGLN3Q9UI15 199 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 SIGLEC9Q9Y336 463 aa7.48□□□□□ -1.21
HDDC3-204ENST00000559834 VWFP04275 2813 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 ZNF732B4DXR9 585 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 H3BN98 237 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 SOX14O95416 240 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 VSIG10L2P0DP72 767 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 PSG2P11465 335 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 ACKR3P25106 362 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 DCTDP32321 178 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 MAP2K3P46734 347 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 GPM6AP51674 278 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 MNAT1P51948 309 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 CAPZA1P52907 286 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 GNG3P63215 75 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 GK3PQ14409 553 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 CEACAM21Q3KPI0 293 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 SAMD5Q5TGI4 173 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 CD300LDQ6UXZ3 194 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 CYP2R1Q6VVX0 501 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 DEFB107AQ8IZN7 70 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 FAM185AQ8N0U4 392 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 KLHDC1Q8N7A1 406 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 ZNRF1Q8ND25 227 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR4S1Q8NGB4 309 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR5A2Q8NGI9 324 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR5K1Q8NHB7 308 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OTOSQ8NHW6 89 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 PPP1R35Q8TAP8 253 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 FAM107BQ9H098 131 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 OR51I2Q9H344 312 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 MAGIXQ9H6Y5 334 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 ACTR3BQ9P1U1 418 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 FOXJ3Q9UPW0 622 aa7.47□□□□□ -1.21
HDDC3-204ENST00000559834 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
HDDC3-204ENST00000559834 IGKV1D-17A0A075B6S4 117 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 ACOD1A6NK06 481 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 OR5B21A6NL26 309 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 FAM183AA6NL82 134 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 PRR23D1E9PI22 279 aaPredicted RBP7.46□□□□□ -1.22
HDDC3-204ENST00000559834 H3BUI4 141 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 SLC1A7O00341 560 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 PIN1P1O15428 100 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 GSC2O15499 205 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 SNX3O60493 162 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 PEX14O75381 377 aa7.46□□□□□ -1.22
HDDC3-204ENST00000559834 RHBDL1O75783 438 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms