RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PHYHO14832 338 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ARPC3O15145 178 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 RGS10O43665 173 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 CLPXO76031 633 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 GABARAPO95166 117 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 LHBP01229 141 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 IGHV4-59P01825 116 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 H1F0P07305 194 aaKnown RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L2P0CJ85 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L3P0CJ86 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L4P0CJ87 422 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L5P0CJ88 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L6P0CJ89 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L7P0CJ90 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 HIST1H1CP16403 213 aaKnown RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 RRM2P31350 389 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OTX1P32242 354 aaPredicted RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 RPS27P42677 84 aaKnown RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 RAG2P55895 527 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 PROK1P58294 105 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ID3Q02535 119 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ZNF92Q03936 586 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 EMX1Q04741 257 aaPredicted RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP3-215ENST00000559771 NEDD8Q15843 81 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 SNAI3Q3KNW1 292 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 UBE2UQ5VVX9 321 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OLFML2AQ68BL7 652 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 ASPHD2Q6ICH7 369 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 TMEM179BQ7Z7N9 219 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 WDR86Q86TI4 376 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ZBTB46Q86UZ6 589 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 C11orf53Q8IXP5 236 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 GCSAMQ8N6F7 178 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 GJC3Q8NFK1 279 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 BPIFB6Q8NFQ5 453 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OR8B3Q8NGG8 313 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OR5L1Q8NGL2 311 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OR4C15Q8NGM1 316 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 RHOXF1Q8NHV9 184 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 LINC01006Q8NI28 216 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 PLEKHA8Q96JA3 519 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 Q96MT0 163 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 OR8B2Q96RD0 313 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 NMNAT3Q96T66 252 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ATF6BQ99941 703 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 PCGF1Q9BSM1 259 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 FN3KQ9H479 309 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 PPP1R3EQ9H7J1 279 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 NOX4Q9NPH5 578 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 UFSP2Q9NUQ7 469 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 CNOT2Q9NZN8 540 aaKnown RBP4.78□□□□□ -1.64
USP3-215ENST00000559771 DUX4Q9UBX2 424 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 CLN8Q9UBY8 286 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 CYB5R1Q9UHQ9 305 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 ENPP5Q9UJA9 477 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 LYVE1Q9Y5Y7 322 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 U3KQV3 271 aa4.78□□□□□ -1.64
USP3-215ENST00000559771 WNK1Q9H4A3 2382 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IGHV1-69DA0A0B4J2H0 117 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 A0A0G2JK05 382 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 A0A0U1RQK1 487 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IRGMA1A4Y4 181 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 EFCAB10A6NFE3 127 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 LRRC30A6NM36 301 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CD300LBA8K4G0 201 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 PTGES3LE9PB15 166 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 F5H5K5 113 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ENSAO43768 121 aaKnown RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 TOX4O94842 621 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CCNB2O95067 398 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 KNG1P01042 644 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IGHV1-69P01742 117 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 HTR1AP08908 422 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 PIPP12273 146 aaPredicted RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 AMY2BP19961 511 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 PRKACGP22612 351 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CA6P23280 308 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CRABP1P29762 137 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IFNA8P32881 189 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 POLR2IP36954 125 aaKnown RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 IFNGR2P38484 337 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IER3P46695 156 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 GSSP48637 474 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 DLX1P56177 255 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 BPIFB3P59826 476 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CDC42P60953 191 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 TBCEQ15813 527 aaPredicted RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 TAF9Q16594 264 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 DGUOKQ16854 277 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 TIMM50Q3ZCQ8 353 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 SLC25A30Q5SVS4 291 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 GLYATL3Q5SZD4 288 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 GPR157Q5UAW9 335 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 RNLSQ5VYX0 342 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 LAIR2Q6ISS4 152 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms