RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MSR1P21757 451 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 S100A10P60903 97 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 SLC35A1P78382 337 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 PJVKQ0ZLH3 352 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 H3F3CQ6NXT2 135 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 GUSBP11Q6P575 273 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 IL34Q6ZMJ4 242 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 EMG1Q92979 244 aaKnown RBP14.54□□□□□ -0.08
SPG11-215ENST00000559193 TM2D1Q9BX74 207 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 GSKIPQ9P0R6 139 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 DNAJB11Q9UBS4 358 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 RARRES3Q9UL19 164 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 CHCHD2Q9Y6H1 151 aaPredicted RBP14.54□□□□□ -0.08
SPG11-215ENST00000559193 FIGNL2A6NMB9 653 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 DHRS3O75911 302 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 ADH6P28332 368 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 EIF1P41567 113 aaKnown RBP14.54□□□□□ -0.08
SPG11-215ENST00000559193 SLC16A14Q7RTX9 510 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 DEFB126Q9BYW3 111 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 TREM1Q9NP99 234 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 A0A0U1RQV5 110 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 A0A1W2PQM1 296 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 SERPINE3A8MV23 424 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 TLX3O43711 291 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 KNG1P01042 644 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 PET100P0DJ07 73 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 FCGR2AP12318 317 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 CSNK1A1P48729 337 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 ZNF84P51523 738 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 RSPO4Q2I0M5 234 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 RSPO1Q2MKA7 263 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 CHRFAM7AQ494W8 412 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 PIGTQ969N2 578 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 NABP1Q96AH0 204 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 NECAB3Q96P71 396 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 CHST5Q9GZS9 411 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 AKIRIN1Q9H9L7 192 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 ZNF701Q9NV72 531 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 UQCC1Q9NVA1 299 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 MCTS1Q9ULC4 181 aaKnown RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 SURF2Q15527 256 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 C10orf128Q5T292 105 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 RPL7L1Q6DKI1 246 aaKnown RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 DHRS7BQ6IAN0 325 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 LINC00518Q8N0U6 118 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 SHDQ96IW2 340 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 SMIM8Q96KF7 97 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 NELFAQ9H3P2 528 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 SAV1Q9H4B6 383 aaPredicted RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 ACKR4Q9NPB9 350 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 FAM96BQ9Y3D0 163 aa14.53□□□□□ -0.08
SPG11-215ENST00000559193 ASCC3Q8N3C0 2202 aaKnown RBP14.53□□□□□ -0.08
SPG11-215ENST00000559193 ONECUT2O95948 504 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 SFTPBP07988 381 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 RCC1P18754 421 aaPredicted RBP14.52□□□□□ -0.08
SPG11-215ENST00000559193 NPBWR1P48145 328 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 H3F3AP84243 136 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 RBM39Q14498 530 aaKnown RBP14.52□□□□□ -0.08
SPG11-215ENST00000559193 C6orf201Q7Z4U5 140 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 GJC3Q8NFK1 279 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 TMEM54Q969K7 222 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 ZNF385AQ96PM9 386 aaKnown RBP14.52□□□□□ -0.08
SPG11-215ENST00000559193 SEC11CQ9BY50 192 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 HRH4Q9H3N8 390 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 PIGLQ9Y2B2 252 aa14.52□□□□□ -0.08
SPG11-215ENST00000559193 IGHV3-15A0A0B4J1V0 119 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 IGHV5-10-1A0A0J9YXX1 117 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 H7C2Y5 167 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 MSTNO14793 375 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 LRP3O75074 770 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 HKR1P10072 659 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 ZNF708P17019 499 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 CPT2P23786 658 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 FOXL2NBQ6ZUU3 175 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 LRRC18Q8N456 261 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 PP6455Q8WZ26 134 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 HAS2Q92819 552 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 HDHD3Q9BSH5 251 aaPredicted RBP14.52□□□□□ -0.09
SPG11-215ENST00000559193 ELL3Q9HB65 397 aaPredicted RBP14.52□□□□□ -0.09
SPG11-215ENST00000559193 C19orf25Q9UFG5 118 aaPredicted RBP14.52□□□□□ -0.09
SPG11-215ENST00000559193 LHX6Q9UPM6 363 aa14.52□□□□□ -0.09
SPG11-215ENST00000559193 C14orf166Q9Y224 244 aaKnown RBP14.52□□□□□ -0.09
SPG11-215ENST00000559193 KLF2Q9Y5W3 355 aaPredicted RBP14.52□□□□□ -0.09
SPG11-215ENST00000559193 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 CELA2AP08217 269 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 CD63P08962 238 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 DBHP09172 617 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 MUC1P15941 1255 aaPredicted RBP14.51□□□□□ -0.09
SPG11-215ENST00000559193 IGFBP4P22692 258 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 LPAR6P43657 344 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 CCL7P80098 99 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 SPEM2Q0P670 501 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 Q6ZSR3 168 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 GALNTL5Q7Z4T8 443 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 FOXRED2Q8IWF2 684 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 SAT2Q96F10 170 aaPredicted RBP14.51□□□□□ -0.09
SPG11-215ENST00000559193 NRIP2Q9BQI9 281 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 RHOFQ9HBH0 211 aa14.51□□□□□ -0.09
SPG11-215ENST00000559193 NCOA6Q14686 2063 aaPredicted RBP14.51□□□□□ -0.09
SPG11-215ENST00000559193 CFAP54Q96N23 3096 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms