RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 DTX4Q9Y2E6 619 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RCL1Q9Y2P8 373 aaKnown RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 A6NLC8 198 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 G3V3Y1 287 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 AP4M1O00189 453 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 RAB29O14966 203 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OR7C1O76099 320 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 SFT2D2O95562 160 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 EFNA3P52797 238 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 SRYQ05066 204 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 AWAT1Q58HT5 328 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OR2A2Q6IF42 318 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF66Q6ZN08 573 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 OR5B3Q8NH48 314 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 ZNF845Q96IR2 970 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 CTDSP1Q9GZU7 261 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 UCK1Q9HA47 277 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 NPDC1Q9NQX5 325 aaPredicted RBP6.37□□□□□ -1.39
USP3-210ENST00000559192 CD207Q9UJ71 328 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 MMP24Q9Y5R2 645 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 CHD5Q8TDI0 1954 aa6.37□□□□□ -1.39
USP3-210ENST00000559192 HSPB2A8KAH6 182 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 IGKV1D-16P01601 117 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 GLULP15104 373 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 RCC1P18754 421 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 DVL1P1P54792 670 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 PIGPP57054 158 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 B2MP61769 119 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 HTRA3P83110 453 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PLP2Q04941 152 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 TOMM34Q15785 309 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 HSPB2Q16082 182 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ARTNQ5T4W7 220 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PLXDC1Q8IUK5 500 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 GCNT2Q8N0V5 402 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 MAGT1Q9H0U3 335 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 SLC5A6Q9Y289 635 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 TMEM184BQ9Y519 407 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 NUMA1Q14980 2115 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 F6UZH7 168 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 NRG2O14511 850 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 ARPC3O15145 178 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 DUSP1P28562 367 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ZNF121P58317 390 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 UBE2G2P60604 165 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PSG6Q00889 435 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ARL16Q0P5N6 197 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PMS2P11Q13670 270 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CD226Q15762 336 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 C9orf135Q5VTT2 229 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 C1QL3Q5VWW1 255 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 LIPHQ8WWY8 451 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 MR1Q95460 341 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ANKRD9Q96BM1 317 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 CCNL2Q96S94 520 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 SEC11CQ9BY50 192 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 KCNE5Q9UJ90 142 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PNR3 127 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 OR4C45A6NMZ5 311 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 HSBP1O75506 76 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 DUS4LO95620 317 aaKnown RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 GP1BAP07359 652 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ZNF17P17021 662 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 DRD3P35462 400 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 TNFRSF4P43489 277 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 KIR3DL2P43630 455 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 HSD17B7P56937 341 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 GGTLC2Q14390 218 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 MSMO1Q15800 293 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 FAM162BQ5T6X4 162 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ARL6IP6Q8N6S5 226 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CLEC1AQ8NC01 280 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 RPUSD4Q96CM3 377 aaKnown RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 PIK3IP1Q96FE7 263 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 SHARPINQ9H0F6 387 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CHST11Q9NPF2 352 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 GREB1Q4ZG55 1949 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 RAB27BO00194 218 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 DVL1O14640 695 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CRHP06850 196 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CTLA4P16410 223 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ABCD3P28288 659 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PTGFRP43088 359 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 PKIAP61925 76 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 DOK3Q7L591 496 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 SLC25A42Q86VD7 318 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 TMEM37Q8WXS4 190 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ROBO4Q8WZ75 1007 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 NUDT16L1Q9BRJ7 211 aaKnown RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 AMDHD2Q9Y303 409 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 MRPS18BQ9Y676 258 aaKnown RBP6.36□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PNV4 684 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 ONECUT2O95948 504 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 OR10J4P0C629 311 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 FPR2P25090 351 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 SLC35A1P78382 337 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 PRSS54Q6PEW0 395 aa6.36□□□□□ -1.39
USP3-210ENST00000559192 CLEC18BQ6UXF7 455 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms