RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 HSD11B1P28845 292 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 RBMS2Q15434 407 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 GABRA6Q16445 453 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 SGCAQ16586 387 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 HIKESHIQ53FT3 197 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 SFRP5Q5T4F7 317 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF627Q7L945 461 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 SPICQ8N5J4 248 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 JAGN1Q8N5M9 183 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR2AJ1Q8NGZ0 328 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 FGGYQ96C11 551 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 SORCS2Q96PQ0 1159 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 SCPEP1Q9HB40 452 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF224Q9NZL3 707 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 RTTNQ86VV8 2226 aa13.75□□□□□ -0.21
CDC42BPB-204ENST00000559043 A0A1B0GTI1 187 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SYT7O43581 403 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 RAD51DO75771 328 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 AKAIN1P0CW23 69 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 BDKRB2P30411 391 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 CCKARP32238 428 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 MRPS34P82930 218 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 TFF3Q07654 80 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 P2RY6Q15077 328 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF626Q68DY1 528 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SKA3Q8IX90 412 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR4D6Q8NGJ1 314 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR1K1Q8NGR3 316 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 CA5BP1Q8WTZ4 195 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SEH1LQ96EE3 360 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 TENM4Q6N022 2769 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 LPLP06858 475 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ANXA7P20073 488 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ACTBP60709 375 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ACTG1P63261 375 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 GALK2Q01415 458 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ENDOGQ14249 297 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 LRRC18Q8N456 261 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SLC22A24Q8N4F4 322 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR4D10Q8NGI6 311 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR1J2Q8NGS2 313 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 ADAT3Q96EY9 351 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 SEC22CQ9BRL7 303 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 TMEM138Q9NPI0 162 aa13.74□□□□□ -0.21
CDC42BPB-204ENST00000559043 A0A1W2PR80 420 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 G3V3Q6 166 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 NR2C1P13056 603 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 GTF2F2P13984 249 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF84P51523 738 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 SNTB1Q13884 538 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 STK11Q15831 433 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 NLRC3Q7RTR2 1065 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 ABHD12BQ7Z5M8 362 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 WDR31Q8NA23 367 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR1M1Q8NGA1 313 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 FBXO17Q96EF6 278 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 UQCC2Q9BRT2 126 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF416Q9BWM5 594 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 METTL17Q9H7H0 456 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 CNTD2Q9H8S5 307 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 ASH2LQ9UBL3 628 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF107Q9UII5 783 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 POLR1DQ9Y2S0 133 aa13.73□□□□□ -0.21
CDC42BPB-204ENST00000559043 CREBL2O60519 120 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 FBXL19-AS1Q494R0 122 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 ZNF808Q8N4W9 903 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 TMEM229BQ8NBD8 167 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR5D14Q8NGL3 314 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 J3QKU1 62 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 CD3DP04234 171 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 MELTFP08582 738 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 AGAP20933 346 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 DNASE1P24855 282 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 ASCL1P50553 236 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 HCFC1P51610 2035 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 TAS2R19P59542 299 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 LSM6P62312 80 aaKnown RBP13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 QRFPP83859 136 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 STEAP1BQ6NZ63 245 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 BHLHA15Q7RTS1 189 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 CDH26Q8IXH8 852 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR52N4Q8NGI2 321 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 OR51E1Q8TCB6 317 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 S100PBPQ96BU1 408 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 BOD1Q96IK1 185 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 GINS4Q9BRT9 223 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 KCNJ16Q9NPI9 418 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 RAB22AQ9UL26 194 aa13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 HELZ2Q9BYK8 2649 aaKnown RBP13.72□□□□□ -0.21
CDC42BPB-204ENST00000559043 RER1O15258 196 aa13.71□□□□□ -0.21
CDC42BPB-204ENST00000559043 HLA-HP01893 362 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms