RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SDR9C7Q8NEX9 313 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 OR2AJ1Q8NGZ0 328 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 OR4K13Q8NH42 304 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 PPP1R35Q8TAP8 253 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 LRRC29Q8WV35 223 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 SPTSSAQ969W0 71 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 CCL13Q99616 98 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
SPG11-212ENST00000558790 CAB39Q9Y376 341 aaPredicted RBP7.88□□□□□ -1.15
SPG11-212ENST00000558790 MEIOCA2RUB1 952 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 OR6C68A6NDL8 312 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 B5MCH6 92 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 H3BUX3 64 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 BHLHE40O14503 412 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 ACOT8O14734 319 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 DIRAS1O95057 198 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 PAHP00439 452 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 SLC2A1P11166 492 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 NCK1P16333 377 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 EEF1B2P24534 225 aaKnown RBP7.87□□□□□ -1.15
SPG11-212ENST00000558790 SLC7A2P52569 658 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 EFNB2P52799 333 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 SLC36A3Q495N2 470 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 C1orf122Q6ZSJ8 110 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 ARPINQ7Z6K5 226 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 C11orf53Q8IXP5 236 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 OR52J3Q8NH60 311 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 OR5R1Q8NH85 324 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 MRAPQ8TCY5 172 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 NPRL2Q8WTW4 380 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 FAM162AQ96A26 154 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 SEH1LQ96EE3 360 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 FUZQ9BT04 418 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 OR52D1Q9H346 318 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 KRCC1Q9NPI7 259 aaPredicted RBP7.87□□□□□ -1.15
SPG11-212ENST00000558790 MRGBPQ9NV56 204 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 NDUFAF4Q9P032 175 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 PRPF19Q9UMS4 504 aaKnown RBP7.87□□□□□ -1.15
SPG11-212ENST00000558790 HERC2O95714 4834 aa7.87□□□□□ -1.15
SPG11-212ENST00000558790 HMGB1P1B2RPK0 211 aaPredicted RBP7.86□□□□□ -1.15
SPG11-212ENST00000558790 ARPC3O15145 178 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 TFF1P04155 84 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 MUC1P15941 1255 aaPredicted RBP7.86□□□□□ -1.15
SPG11-212ENST00000558790 SLC6A6P31641 620 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 PYCR1P32322 319 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 GSK3BP49841 420 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 MICBQ29980 383 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 STUMQ69YW2 141 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 CGB2Q6NT52 195 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 ZNF529Q6P280 563 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 DRAM2Q6UX65 266 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 WDR82Q6UXN9 313 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 FAM86B1Q8N7N1 296 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 SPERTQ8NA61 448 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 ZBTB34Q8NCN2 500 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 OR8S1Q8NH09 359 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 C8orf46Q8TAG6 207 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 C17orf50Q8WW18 174 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 TFAP2CQ92754 450 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 TNFRSF14Q92956 283 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 COPS4Q9BT78 406 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 DCTN5Q9BTE1 182 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 IFT27Q9BW83 186 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 OPA3Q9H6K4 179 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 KCNG2Q9UJ96 466 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 AP3M1Q9Y2T2 418 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 CAPN7Q9Y6W3 813 aa7.86□□□□□ -1.15
SPG11-212ENST00000558790 TVP23AA6NH52 213 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 RHCEP18577 417 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 PRKXP51817 358 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 PTTG1IPP53801 180 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPG11-212ENST00000558790 MZT1Q08AG7 82 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 LY6EQ16553 131 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 C8orf82Q6P1X6 216 aaPredicted RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 SLC36A1Q7Z2H8 476 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 DPY19L4Q7Z388 723 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 DCXRQ7Z4W1 244 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 ZDHHC21Q8IVQ6 265 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 LYG1Q8N1E2 194 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 CYB561A3Q8NBI2 242 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 BEND2Q8NDZ0 799 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 PROKR2Q8NFJ6 384 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 OR1M1Q8NGA1 313 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 OR4C13Q8NGP0 309 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 ZNRF4Q8WWF5 429 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 SPSB4Q96A44 273 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 C12orf43Q96C57 262 aaKnown RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 C7orf34Q96L11 122 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 NSRP1Q9H0G5 558 aaKnown RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 PPP1R3EQ9H7J1 279 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 RNPEPL1Q9HAU8 725 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 FGFR1OP2Q9NVK5 253 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 AURKAIP1Q9NWT8 199 aaPredicted RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 FAM32AQ9Y421 112 aaKnown RBP7.85□□□□□ -1.15
SPG11-212ENST00000558790 N6AMT1Q9Y5N5 214 aa7.85□□□□□ -1.15
SPG11-212ENST00000558790 COMMD3-BMI1R4GMX3 469 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms