RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 HOXA4Q00056 320 aaPredicted RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 MRPL28Q13084 256 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 HFEQ30201 348 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 FAM76BQ5HYJ3 339 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF826PQ6ZT77 177 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 RGP1Q92546 391 aaPredicted RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 MYDGFQ969H8 173 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 UFSP2Q9NUQ7 469 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 CHCHD3Q9NX63 227 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 ENPP5Q9UJA9 477 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 LSM2Q9Y333 95 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 NOP16Q9Y3C1 178 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 DHRS7CA6NNS2 312 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 PPIHO43447 177 aaKnown RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 MT-ND2P03891 347 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 GRPP07492 148 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 GNALP38405 381 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 LOXL1Q08397 574 aaPredicted RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 CDK5R1Q15078 307 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 CCDC58Q4VC31 144 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 CEP78Q5JTW2 689 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 RBM48Q5RL73 367 aaKnown RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 FAM201AQ5SY85 155 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 DMKNQ6E0U4 476 aaPredicted RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 MOB3CQ70IA8 216 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 OR1M1Q8NGA1 313 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 Q8TCH9 128 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
LINC01220-201ENST00000558575 OR5M11Q96RB7 305 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
LINC01220-201ENST00000558575 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 LRP5LA4QPB2 252 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 CYB5R3P00387 301 aaPredicted RBP13.02□□□□□ -0.33
LINC01220-201ENST00000558575 NRASP01111 189 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 ZNF154Q13106 437 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 MED21Q13503 144 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 CEACAM21Q3KPI0 293 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 CLVS2Q5SYC1 327 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 FTMTQ8N4E7 242 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 ZNF676Q8N7Q3 588 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 CCDC54Q8NEL0 328 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 OR8S1Q8NH09 359 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 OR5AK2Q8NH90 309 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 FGGYQ96C11 551 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 C1orf159Q96HA4 380 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 RNF170Q96K19 258 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 MICU1Q9BPX6 476 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 GPR173Q9NS66 373 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 HHLA2Q9UM44 414 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 LRRC42Q9Y546 428 aa13.02□□□□□ -0.33
LINC01220-201ENST00000558575 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.01□□□□□ -0.33
LINC01220-201ENST00000558575 TMEM212A6NML5 194 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 CLDN25C9JDP6 229 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 RGS10O43665 173 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 ZNF205O95201 554 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 IGHV4-31P0DP07 118 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 IL2RGP31785 369 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 WNT4P56705 351 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.01□□□□□ -0.33
LINC01220-201ENST00000558575 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 Q9H521 79 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 METTL17Q9H7H0 456 aaPredicted RBP13.01□□□□□ -0.33
LINC01220-201ENST00000558575 C1orf123Q9NWV4 160 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 ERGIC3Q9Y282 383 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 NPTNQ9Y639 398 aa13.01□□□□□ -0.33
LINC01220-201ENST00000558575 IGKV1-9A0A0C4DH69 117 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 ZNF732B4DXR9 585 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 CDIPTO14735 213 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 MYL12BO14950 172 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 LHBP01229 141 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 IGHV2-70P01814 119 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 MAP2K4P45985 399 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 GPM6AP51674 278 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 CDH15P55291 814 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 LMO4P61968 165 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 RPS11P62280 158 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01220-201ENST00000558575 SLC3A1Q07837 685 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 ACSM1Q08AH1 577 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 ZMYND11Q15326 602 aa13□□□□□ -0.33
LINC01220-201ENST00000558575 PDLIM3Q53GG5 364 aaPredicted RBP13□□□□□ -0.33
LINC01220-201ENST00000558575 PLCXD3Q63HM9 321 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms