RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 BOLLQ8N9W6 283 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 C19orf18Q8NEA5 215 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 ZNF671Q8TAW3 534 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 TMEM163Q8TC26 289 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 PIGCQ92535 297 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 CENPNQ96H22 339 aaPredicted RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 MED30Q96HR3 178 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 RNF170Q96K19 258 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 FAM71F1Q96KD3 344 aaPredicted RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 LYZL4Q96KX0 146 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 WDFY2Q96P53 400 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 TECTBQ96PL2 329 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 CNN2Q99439 309 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 PKP2Q99959 881 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 CNTD2Q9H8S5 307 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 MOB1AQ9H8S9 216 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 WARS2Q9UGM6 360 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 NUFIP1Q9UHK0 495 aaKnown RBP8.38□□□□□ -1.07
USP3-207ENST00000558218 KLHDC2Q9Y2U9 406 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 KPTNQ9Y664 436 aa8.38□□□□□ -1.07
USP3-207ENST00000558218 OR5B21A6NL26 309 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 DHRS7CA6NNS2 312 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.37□□□□□ -1.07
USP3-207ENST00000558218 NDUFB3O43676 98 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 TOX4O94842 621 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 GYPAP02724 150 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 IGHV4-38-2P0DP08 117 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 MMP9P14780 707 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 ACKR3P25106 362 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 HCCSP53701 268 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 GFOD2Q3B7J2 385 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 CDONQ4KMG0 1287 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 LRRC10Q5BKY1 277 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 C1orf122Q6ZSJ8 110 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 Q6ZSR3 168 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 BTN2A1Q7KYR7 527 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 THAP5Q7Z6K1 395 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 ZDHHC23Q8IYP9 409 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 BCL6BQ8N143 479 aaPredicted RBP8.37□□□□□ -1.07
USP3-207ENST00000558218 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 TCEANCQ8N8B7 351 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 SCCPDHQ8NBX0 429 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 LY6G5BQ8NDX9 201 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 CCDC54Q8NEL0 328 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 OR8J1Q8NGP2 316 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 SGMS2Q8NHU3 365 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 FAM81AQ8TBF8 368 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 NPRL2Q8WTW4 380 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 TRUB1Q8WWH5 349 aaKnown RBP8.37□□□□□ -1.07
USP3-207ENST00000558218 ZNF48Q96MX3 618 aaPredicted RBP8.37□□□□□ -1.07
USP3-207ENST00000558218 PBOV1Q9GZY1 135 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 OR51I2Q9H344 312 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 CLN6Q9NWW5 311 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 RASL12Q9NYN1 266 aa8.37□□□□□ -1.07
USP3-207ENST00000558218 RPUSD1Q9UJJ7 312 aaKnown RBP8.37□□□□□ -1.07
USP3-207ENST00000558218 TRAV40A0A0B4J280 105 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 A0A1B0GVI7 797 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 DNAJC9-AS1A6NH13 148 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 SRSF10O75494 262 aaKnown RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 CIB2O75838 187 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 SULT1C4O75897 302 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 DHRS3O75911 302 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ACAA1P09110 424 aaPredicted RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 H2AFB2P0C5Z0 115 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 OR2T7P0C7T2 308 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 EGR1P18146 543 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 RPL15P61313 204 aaKnown RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 CSNK2BP67870 215 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 SLC9A3R2Q15599 337 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 AWAT1Q58HT5 328 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 WDR38Q5JTN6 314 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 C16orf87Q6PH81 154 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ZNF322Q6U7Q0 402 aaPredicted RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 METAP1DQ6UB28 335 aaPredicted RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 Q6YL49 198 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ELMOD2Q8IZ81 293 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 CMTM4Q8IZR5 234 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 KIR3DL3Q8N743 410 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 OR2T27Q8NH04 317 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 C8orf46Q8TAG6 207 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 GATAD2BQ8WXI9 593 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 RFKQ969G6 155 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 C1orf147Q96MC9 270 aaPredicted RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 RAB3IPQ96QF0 476 aaPredicted RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 RBM4BQ9BQ04 359 aaKnown RBP8.36□□□□□ -1.07
USP3-207ENST00000558218 PCGF1Q9BSM1 259 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ADGRL4Q9HBW9 690 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 SMURF1Q9HCE7 757 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 ENPP5Q9UJA9 477 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 SNX5Q9Y5X3 404 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 POMT1Q9Y6A1 747 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 R4GMQ9 66 aa8.36□□□□□ -1.07
USP3-207ENST00000558218 CENPVL3A0A0U1RRI6 287 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 A0A1B0GUS0 222 aa8.35□□□□□ -1.07
USP3-207ENST00000558218 ZNF670-ZNF695F2Z2N8 137 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms