RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MYOZ1Q9NP98 299 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ACP6Q9NPH0 428 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SLC2A9Q9NRM0 540 aa2□□□□□ -2.09
SPG11-206ENST00000558093 GIN1Q9NXP7 522 aa2□□□□□ -2.09
SPG11-206ENST00000558093 RWDD2AQ9UIY3 292 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TMCO1Q9UM00 188 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TFR2Q9UP52 801 aa2□□□□□ -2.09
SPG11-206ENST00000558093 FARSAQ9Y285 508 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ARL2BPQ9Y2Y0 163 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ZNF337Q9Y3M9 751 aa2□□□□□ -2.09
SPG11-206ENST00000558093 NEUROG3Q9Y4Z2 214 aa2□□□□□ -2.09
SPG11-206ENST00000558093 HEY1Q9Y5J3 304 aa2□□□□□ -2.09
SPG11-206ENST00000558093 KIF1BO60333 1816 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CEP152O94986 1710 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CNTLNQ9NXG0 1405 aa2□□□□□ -2.09
SPG11-206ENST00000558093 CEMIPQ8WUJ3 1361 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 USP47Q96K76 1375 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CAMSAP1Q5T5Y3 1602 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ZBED9Q6R2W3 1325 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 NSG1A0A0A6YYJ2 146 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 A0A1B0GV90 55 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 A6NIZ1 184 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 C21orf140B9A014 251 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 DISC1C4P0D8 188 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 J3QLI3 93 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 DCTN6O00399 190 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 BET1O15155 118 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 PRKYO43930 277 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 MPZL2O60487 215 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 EIF4E2O60573 245 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 UGT1A9O60656 530 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SHOX2O60902 331 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 PFDN1O60925 122 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 AQP8O94778 261 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 IFNA21P01568 189 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RHOCP08134 193 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 NBEAP1P0C6P0 100 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 LINC00614P0C842 121 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 THRAP10827 490 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ABOP16442 354 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CD36P16671 472 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 PGCP20142 388 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 IMPDH1P20839 514 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V1B2P21281 511 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 LEPP41159 167 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 NSG1P42857 185 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 LHX2P50458 406 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 IDH3GP51553 393 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 PRKXP51817 358 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CRYBA4P53673 196 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 BIDP55957 195 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 AP1S2P56377 157 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TAS2R19P59542 299 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 OR2B8PP59922 312 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RBX1P62877 108 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RPL19P84098 196 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 HMGCS1Q01581 520 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 PRKCDQ05655 676 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 EIF4EBP1Q13541 118 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 IRF4Q15306 451 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SPA17Q15506 151 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TAL2Q16559 108 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 POU2AF1Q16633 256 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 DGUOKQ16854 277 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V1FQ16864 119 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TRMT5Q32P41 509 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 SLC25A52Q3SY17 297 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RBM48Q5RL73 367 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 FRMPD2BQ6IN97 320 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 C4orf22Q6V702 233 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 NPSR1Q6W5P4 371 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ACP7Q6ZNF0 438 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 IDO2Q6ZQW0 420 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 C3orf62Q6ZUJ4 267 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SSX7Q7RTT5 188 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 OR6V1Q8N148 313 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 LRRC52Q8N7C0 313 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 UBL4BQ8N7F7 174 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CCDC54Q8NEL0 328 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 OR6K2Q8NGY2 324 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 OR2AE1Q8NHA4 323 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SFXN5Q8TD22 340 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ACER1Q8TDN7 264 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 GPR151Q8TDV0 419 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 OR5P2Q8WZ92 322 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TLCD1Q96CP7 247 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CCDC126Q96EE4 140 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TCEAL4Q96EI5 215 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ZNF641Q96N77 438 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 SERPINB12Q96P63 405 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RNF2Q99496 336 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TSNAXQ99598 290 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 PHB2Q99623 299 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SLC35A5Q9BS91 424 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ZNF2Q9BSG1 426 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 FAIM2Q9BWQ8 316 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 ZNF717Q9BY31 904 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 UGT2B28Q9BY64 529 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 MFSD1Q9H3U5 465 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 C11orf49Q9H6J7 331 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms