RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ANKRD61A6NGH8 418 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 TMEM210A6NLX4 147 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 IRF2P14316 349 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 GPM6AP51674 278 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 TAS2R43P59537 309 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 ZNF154Q13106 437 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 PRSS48Q7RTY5 328 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 ZFP41Q8N8Y5 198 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 FGGYQ96C11 551 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 SMIM19Q96E16 107 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 NARFLQ9H6Q4 476 aa21.52■■□□□ 1.04
SMAD6-202ENST00000557916 SERPINA3P01011 423 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 ZNF20P17024 532 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 CHN2P52757 468 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 GNG3P63215 75 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 DMKNQ6E0U4 476 aaPredicted RBP21.51■■□□□ 1.03
SMAD6-202ENST00000557916 ZNF826PQ6ZT77 177 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 C1orf87Q8N0U7 546 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 PP6455Q8WZ26 134 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 ADAT3Q96EY9 351 aaPredicted RBP21.51■■□□□ 1.03
SMAD6-202ENST00000557916 CHST5Q9GZS9 411 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 RNF7Q9UBF6 113 aa21.51■■□□□ 1.03
SMAD6-202ENST00000557916 LRP5LA4QPB2 252 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 OR5B21A6NL26 309 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 ZNF732B4DXR9 585 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 WNT9BO14905 357 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 DOC2BQ14184 412 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 FAM76BQ5HYJ3 339 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 C11orf53Q8IXP5 236 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 OR5M11Q96RB7 305 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 TLNRD1Q9H1K6 362 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 DHDHQ9UQ10 334 aa21.5■■□□□ 1.03
SMAD6-202ENST00000557916 hCG_1807616A0A1W2PRN6 198 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 ISPDA4D126 451 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 GATBO75879 557 aaKnown RBP21.49■■□□□ 1.03
SMAD6-202ENST00000557916 BTG1P62324 171 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 SPHARQ15513 63 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 UBE2V2Q15819 145 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 TSEN15Q8WW01 171 aaKnown RBP21.49■■□□□ 1.03
SMAD6-202ENST00000557916 RGP1Q92546 391 aaPredicted RBP21.49■■□□□ 1.03
SMAD6-202ENST00000557916 GHSRQ92847 366 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 YTHDF1Q9BYJ9 559 aaKnown RBP21.49■■□□□ 1.03
SMAD6-202ENST00000557916 ZNF281Q9Y2X9 895 aa21.49■■□□□ 1.03
SMAD6-202ENST00000557916 LSM2Q9Y333 95 aaKnown RBP21.49■■□□□ 1.03
SMAD6-202ENST00000557916 PNMA8CA0A1B0GUJ8 204 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 CDIPTO14735 213 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 IGHV2-70P01814 119 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 GABARAPL2P60520 117 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 BDH1Q02338 343 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 MED22Q15528 200 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 SCCPDHQ8NBX0 429 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 CLDND2Q8NHS1 167 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 GPR148Q8TDV2 347 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 RPL3LQ92901 407 aaKnown RBP21.48■■□□□ 1.03
SMAD6-202ENST00000557916 TECTBQ96PL2 329 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 OR51I2Q9H344 312 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 SLC7A11Q9UPY5 501 aa21.48■■□□□ 1.03
SMAD6-202ENST00000557916 ZNF205O95201 554 aa21.47■■□□□ 1.03
SMAD6-202ENST00000557916 CELP19835 753 aa21.47■■□□□ 1.03
SMAD6-202ENST00000557916 ACSM1Q08AH1 577 aa21.47■■□□□ 1.03
SMAD6-202ENST00000557916 ZMYND11Q15326 602 aa21.47■■□□□ 1.03
SMAD6-202ENST00000557916 PPIAL4EA0A075B759 164 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PPIAL4DF5H284 164 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PLPP2O43688 288 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PPIAL4FP0DN26 164 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 MAP2K4P45985 399 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 TMEM249Q2WGJ8 235 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 FAM201AQ5SY85 155 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 WDR82Q6UXN9 313 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 UTS2BQ765I0 119 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 LRRC28Q86X40 367 aaPredicted RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 BOLLQ8N9W6 283 aaKnown RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 NPRL2Q8WTW4 380 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PGLYRP3Q96LB9 341 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 METTL17Q9H7H0 456 aaPredicted RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PPIAL4AQ9Y536 164 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 ZANQ9Y493 2812 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 CR1P17927 2039 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 PQLC2LA1A4F0 135 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 MDH2P40926 338 aaKnown RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 SOX2P48431 317 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 CNN3Q15417 329 aaKnown RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 TRMT10AQ8TBZ6 339 aaKnown RBP21.46■■□□□ 1.03
SMAD6-202ENST00000557916 LRRC29Q8WV35 223 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 SMR3AQ99954 134 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 GAL3ST1Q99999 423 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 LRRC42Q9Y546 428 aa21.46■■□□□ 1.03
SMAD6-202ENST00000557916 FAM230AA0A1W2PPH8 454 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 LHBP01229 141 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 CD1AP06126 327 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 OCM2P0CE71 109 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 IL2RGP31785 369 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 FUT6P51993 359 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 HOXA4Q00056 320 aaPredicted RBP21.45■■□□□ 1.02
SMAD6-202ENST00000557916 YIF1BQ5BJH7 314 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 MED13LQ71F56 2210 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 BIVMQ86UB2 503 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 ZNF573Q86YE8 665 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 SERPINA12Q8IW75 414 aa21.45■■□□□ 1.02
SMAD6-202ENST00000557916 GCSAMQ8N6F7 178 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms