RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ADAT3Q96EY9 351 aaPredicted RBP12.06□□□□□ -0.48
USP3-205ENST00000557884 GAL3ST1Q99999 423 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 COMMD4Q9H0A8 199 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 Q9H521 79 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 METTL17Q9H7H0 456 aaPredicted RBP12.06□□□□□ -0.48
USP3-205ENST00000557884 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 HHLA2Q9UM44 414 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 PNMA8CA0A1B0GUJ8 204 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CDIPTO14735 213 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 MT-ND2P03891 347 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 IGHV4-31P0DP07 118 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 ZNF20P17024 532 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CRHBPP24387 322 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CD80P33681 288 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 GMFBP60983 142 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 GNG3P63215 75 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 SLC35A2P78381 396 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 KRTAP1-1Q07627 177 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 DOC2BQ14184 412 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 ZNF181Q2M3W8 571 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 TMEM42Q69YG0 159 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 RPL22L1Q6P5R6 122 aaKnown RBP12.05□□□□□ -0.48
USP3-205ENST00000557884 KRT74Q7RTS7 529 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 C11orf53Q8IXP5 236 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CCDC54Q8NEL0 328 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 DEFB108BQ8NET1 73 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 TRMT10AQ8TBZ6 339 aaKnown RBP12.05□□□□□ -0.48
USP3-205ENST00000557884 HAVCR2Q8TDQ0 301 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CCDC90BQ9GZT6 254 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 TRIM36Q9NQ86 728 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
USP3-205ENST00000557884 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 TMEM210A6NLX4 147 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 RGS10O43665 173 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 ZNF12P17014 697 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
USP3-205ENST00000557884 EGR1P18146 543 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 WNT4P56705 351 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 LMO4P61968 165 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 UBE2V2Q15819 145 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 RBM48Q5RL73 367 aaKnown RBP12.04□□□□□ -0.48
USP3-205ENST00000557884 SFRP4Q6FHJ7 346 aaPredicted RBP12.04□□□□□ -0.48
USP3-205ENST00000557884 NANOGP1Q8N7R0 232 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 LRRC29Q8WV35 223 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 TSEN15Q8WW01 171 aaKnown RBP12.04□□□□□ -0.48
USP3-205ENST00000557884 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
USP3-205ENST00000557884 CHST5Q9GZS9 411 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 DUSP21Q9H596 190 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
USP3-205ENST00000557884 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 FAM230AA0A1W2PPH8 454 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 OR5B21A6NL26 309 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 OGG1O15527 345 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 DENRO43583 198 aaKnown RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 GATBO75879 557 aaKnown RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 SERPINA3P01011 423 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 EEF1B2P24534 225 aaKnown RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 MDH2P40926 338 aaKnown RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 SOX2P48431 317 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 GZMKP49863 264 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 CYB5R2Q6BCY4 276 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 HAGHLQ6PII5 290 aaPredicted RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 WDR82Q6UXN9 313 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 LRRC28Q86X40 367 aaPredicted RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 SPICQ8N5J4 248 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 RPS4Y2Q8TD47 263 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 MSI2Q96DH6 328 aaKnown RBP12.03□□□□□ -0.48
USP3-205ENST00000557884 SMIM19Q96E16 107 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 OR5M11Q96RB7 305 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 MND1Q9BWT6 205 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 TLNRD1Q9H1K6 362 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 OR51I2Q9H344 312 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 TMEM165Q9HC07 324 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 DHDHQ9UQ10 334 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 PPIAL4AQ9Y536 164 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
USP3-205ENST00000557884 PQLC2LA1A4F0 135 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 FAM157AC9JC47 383 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 RHBDL1O75783 438 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 IGHV2-5P01817 119 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 HEXAP06865 529 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 MAP2K4P45985 399 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 IRF3Q14653 427 aa12.02□□□□□ -0.49
USP3-205ENST00000557884 FAM76BQ5HYJ3 339 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms