RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LGI3Q8N145 548 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 GAPTQ8N292 157 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 STPG2Q8N412 459 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 C14orf178Q8N769 122 aaPredicted RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 C19orf18Q8NEA5 215 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 OR10G6Q8NH81 332 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SYNPRQ8TBG9 265 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 PIFOQ8TCI5 191 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 TCEAL3Q969E4 200 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 DDIT4LQ96D03 193 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 TMEM101Q96IK0 257 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 C1orf147Q96MC9 270 aaPredicted RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 GPR22Q99680 433 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 MRPS26Q9BYN8 205 aaKnown RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 MFSD1Q9H3U5 465 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 ASB8Q9H765 288 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 DIABLOQ9NR28 239 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 BABAM2Q9NXR7 383 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 NUFIP1Q9UHK0 495 aaKnown RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 CD84Q9UIB8 345 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 C3orf18Q9UK00 162 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 CLEC4EQ9ULY5 219 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 MTCH2Q9Y6C9 303 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 VWA8A3KMH1 1905 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PALLDQ8WX93 1383 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TNRQ92752 1358 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ZNFX1Q9P2E3 1918 aaKnown RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 OR2AT4A6NND4 320 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 F5H5K5 113 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 M0R036 132 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 CCRL2O00421 344 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PSPHP1O15172 72 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PI15O43692 258 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ENTPD6O75354 484 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 GABARAPO95166 117 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 IFNA5P01569 189 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 HLA-DPB1P04440 258 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PCCAP05165 728 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 CTSLP07711 333 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 MLNP12872 115 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ZNF7P17097 686 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 CAPN2P17655 700 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 CXCR1P25024 350 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 EVI2BP34910 448 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 NKX2-5P52952 324 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 CDKN2DP55273 166 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 AP3S2P59780 193 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 IFITM3Q01628 133 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 CKAP4Q07065 602 aaKnown RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 NAB1Q13506 487 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ORMDL2Q53FV1 153 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 HES5Q5TA89 166 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PLET1Q6UQ28 207 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 SLC13A5Q86YT5 568 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 LRRC34Q8IZ02 419 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ZNF786Q8N393 782 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 NPBQ8NG41 125 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ACTL9Q8TC94 416 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 RXFP4Q8TDU9 374 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TMEM159Q96B96 161 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 LRRC58Q96CX6 371 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 METTL26Q96S19 204 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ATOH8Q96SQ7 321 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PITX2Q99697 317 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 ARL6Q9H0F7 186 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 OR51V1Q9H2C8 321 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 SPNS1Q9H2V7 528 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TRIM45Q9H8W5 580 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 HRASLSQ9HDD0 168 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 FBXO6Q9NRD1 293 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 HEBP1Q9NRV9 189 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 RBM22Q9NW64 420 aaKnown RBP eCLIP2.78□□□□□ -1.96
TDP1-217ENST00000557782 TMEM9Q9P0T7 183 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 SIGLEC7Q9Y286 467 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TRAPPC4Q9Y296 219 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TP53TG5Q9Y2B4 290 aa2.78□□□□□ -1.96
TDP1-217ENST00000557782 TET2Q6N021 2002 aaPredicted RBP2.78□□□□□ -1.96
TDP1-217ENST00000557782 WDR62O43379 1518 aa2.78□□□□□ -1.97
TDP1-217ENST00000557782 NUP153P49790 1475 aaKnown RBP2.77□□□□□ -1.97
TDP1-217ENST00000557782 DYSFO75923 2080 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 IGHV3-74A0A0B4J1X5 117 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 F5H768 121 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 GPR171O14626 319 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 PHYHO14832 338 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 PFDN6O15212 129 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 LINC01565O15544 149 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 NDUFS5O43920 106 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 RP2O75695 350 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 MOSP00540 346 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 MRPL3P09001 348 aaKnown RBP2.77□□□□□ -1.97
TDP1-217ENST00000557782 P0C879 139 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 C8orf88P0DMB2 117 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 CRISP2P16562 243 aa2.77□□□□□ -1.97
TDP1-217ENST00000557782 UGT2B7P16662 529 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms