RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 OTOSQ8NHW6 89 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 PIGCQ92535 297 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 NIPSNAP1Q9BPW8 284 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 REEP1Q9H902 201 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 NDE1Q9NXR1 346 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 NLKQ9UBE8 527 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 SAMHD1Q9Y3Z3 626 aaKnown RBP13.01□□□□□ -0.33
SCFD1-224ENST00000557713 MAB21L2Q9Y586 359 aa13.01□□□□□ -0.33
SCFD1-224ENST00000557713 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 A0A1W2PQ09 198 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 H3BUX3 64 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 RHBDL1O75783 438 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 LYNP07948 512 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 POU1F1P28069 291 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 GABRA5P31644 462 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 KIR2DS4P43632 304 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 EFNB2P52799 333 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 HERPUD1Q15011 391 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 CRIP3Q6Q6R5 217 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 KCTD8Q6ZWB6 473 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 IQCF1Q8N6M8 205 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 THEM6Q8WUY1 208 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 OTULINQ96BN8 352 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 SSX3Q99909 188 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 MEGF9Q9H1U4 602 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 OR51V1Q9H2C8 321 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 ZNF222Q9UK12 451 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 SIGLEC9Q9Y336 463 aa13□□□□□ -0.33
SCFD1-224ENST00000557713 SF3B6Q9Y3B4 125 aaKnown RBP13□□□□□ -0.33
SCFD1-224ENST00000557713 SELENOFO60613 162 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 PSG2P11465 335 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 GLRA1P23415 457 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 GABRA2P47869 451 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 BLMHQ13867 455 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 Q6ZTK2 550 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 ZDHHC23Q8IYP9 409 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 ZNRF1Q8ND25 227 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 OR10G2Q8NGC3 310 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 OR8B12Q8NGG6 310 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 OR5D13Q8NGL4 314 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 TEX47Q8TBZ9 253 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 CFHR4Q92496 578 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 RORBQ92753 470 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 FEVQ99581 238 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 ELL3Q9HB65 397 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-224ENST00000557713 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
SCFD1-224ENST00000557713 TRBV23-1A0A0A0MS06 115 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 G3V4G9 280 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 H0YAE9 185 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 H3BN98 237 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 GPM6AP51674 278 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 PSMA6P60900 246 aaKnown RBP12.98□□□□□ -0.33
SCFD1-224ENST00000557713 MS4A2Q01362 244 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 AANATQ16613 207 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 KPRPQ5T749 579 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-224ENST00000557713 PLBD1Q6P4A8 553 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 C11orf88Q6PI97 169 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 PAPD5Q8NDF8 572 aaKnown RBP12.98□□□□□ -0.33
SCFD1-224ENST00000557713 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 FAM234AQ9H0X4 552 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 NIPAL2Q9H841 368 aa12.98□□□□□ -0.33
SCFD1-224ENST00000557713 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-224ENST00000557713 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
SCFD1-224ENST00000557713 OPN1MWP04001 364 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
SCFD1-224ENST00000557713 OPN1MW2P0DN77 364 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 OPN1MW3P0DN78 364 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 PAICSP22234 425 aaKnown RBP12.97□□□□□ -0.33
SCFD1-224ENST00000557713 MAP2K3P46734 347 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 GNG3P63215 75 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 TRIM25Q14258 630 aaKnown RBP12.97□□□□□ -0.33
SCFD1-224ENST00000557713 GK3PQ14409 553 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 GINS1Q14691 196 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 LY6EQ16553 131 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
SCFD1-224ENST00000557713 SAMD5Q5TGI4 173 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 C11orf42Q8N5U0 333 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 TMEM185AQ8NFB2 350 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 OR51G2Q8NGK0 314 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 ZNF671Q8TAW3 534 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 GIPC3Q8TF64 312 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 MUC13Q9H3R2 512 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 TAS2R1Q9NYW7 299 aa12.97□□□□□ -0.33
SCFD1-224ENST00000557713 FOXJ3Q9UPW0 622 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms