RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 HIVEP2P31629 2446 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 MT-ND2P03891 347 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 FAHP16930 419 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF20P17024 532 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 PRKACBP22694 351 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 FUT6P51993 359 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 PRSS12P56730 875 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 BTG1P62324 171 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF154Q13106 437 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 IRF3Q14653 427 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 CNN3Q15417 329 aaKnown RBP11.54□□□□□ -0.56
SHMT2-234ENST00000557703 SPHARQ15513 63 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 YIF1BQ5BJH7 314 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 OR2G6Q5TZ20 316 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 MOGAT3Q86VF5 341 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 MS4A15Q8N5U1 240 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 PARP16Q8N5Y8 322 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 GATAD2BQ8WXI9 593 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 C12orf43Q96C57 262 aaKnown RBP11.54□□□□□ -0.56
SHMT2-234ENST00000557703 CPNE2Q96FN4 548 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-234ENST00000557703 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 SOX7Q9BT81 388 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 CLEC2DQ9UHP7 191 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 WIPI2Q9Y4P8 454 aa11.54□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF469Q96JG9 3925 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-234ENST00000557703 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 LYNX1G3V0Z9 82 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 LHBP01229 141 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 LYNX1P0DP58 116 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 MUC1P15941 1255 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-234ENST00000557703 EEF1B2P24534 225 aaKnown RBP11.53□□□□□ -0.56
SHMT2-234ENST00000557703 MVKQ03426 396 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 PLCXD3Q63HM9 321 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 MOB3CQ70IA8 216 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 OR13C3Q8NGS6 347 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 RHOFQ9HBH0 211 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 RASL12Q9NYN1 266 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 DHDHQ9UQ10 334 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 POLDIP2Q9Y2S7 368 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 LRRC42Q9Y546 428 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 ZANQ9Y493 2812 aa11.53□□□□□ -0.56
SHMT2-234ENST00000557703 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 A6NLC8 198 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 ZNF732B4DXR9 585 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 E9PI62 339 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 GRPP07492 148 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PCMT1P22061 227 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 MAPK3P27361 379 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-234ENST00000557703 TRAM1Q15629 374 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 TBCEQ15813 527 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-234ENST00000557703 ODF4Q2M2E3 257 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 RDH10Q8IZV5 341 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 SVOPQ8N4V2 548 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 HPSE2Q8WWQ2 592 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 GHSRQ92847 366 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PDCD1LG2Q9BQ51 273 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PKIBQ9C010 78 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 DNTTIP1Q9H147 329 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 OR51I2Q9H344 312 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 C1orf123Q9NWV4 160 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 MIOXQ9UGB7 285 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
SHMT2-234ENST00000557703 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
SHMT2-234ENST00000557703 IGHV4-61A0A0C4DH41 118 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 SRRM5B3KS81 715 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 B4DSR2 109 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 LGALS8O00214 317 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-234ENST00000557703 MPZP25189 248 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 PSMA1P25786 263 aaKnown RBP11.51□□□□□ -0.57
SHMT2-234ENST00000557703 PMELP40967 661 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 RBP2P50120 134 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 GPM6AP51674 278 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 GTF2A1P52655 376 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-234ENST00000557703 ATP1B3P54709 279 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 MPPED2Q15777 294 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 MICBQ29980 383 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 Q499Y3 187 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 TEX36Q5VZQ5 186 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 CYB5R2Q6BCY4 276 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 WDR82Q6UXN9 313 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 LHFPL2Q6ZUX7 228 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 KCTD8Q6ZWB6 473 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 Q8IYB0 196 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 SCCPDHQ8NBX0 429 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 PHYHIPQ92561 330 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 FCGR1BQ92637 280 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 FGGYQ96C11 551 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 BORCS8Q96FH0 119 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 GAL3ST1Q99999 423 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 ZCCHC4Q9H5U6 513 aa11.51□□□□□ -0.57
SHMT2-234ENST00000557703 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms