RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MCOLN3Q8TDD5 553 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 DTD1Q8TEA8 209 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CMTM5Q96DZ9 223 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SGTBQ96EQ0 304 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 MAGEB18Q96M61 343 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 WFIKKN1Q96NZ8 548 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 AGMATQ9BSE5 352 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 BEX2Q9BXY8 128 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 MRPS26Q9BYN8 205 aaKnown RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PORCNQ9H237 461 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PLEKHA1Q9HB21 404 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 C6orf50Q9HD87 102 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SLC7A10Q9NS82 523 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 C19orf12Q9NSK7 152 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 RMND1Q9NWS8 449 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SLC25A37Q9NYZ2 338 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 VAPAQ9P0L0 249 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 DEC1Q9P2X7 70 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PRG4Q92954 1404 aaPredicted RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ABCA9Q8IUA7 1624 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ABCA8O94911 1581 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 SAMD9Q5K651 1589 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 STRCP1A6NGW2 1772 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 CDC42BPAQ5VT25 1732 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 C3P01024 1663 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 CAMTA1Q9Y6Y1 1673 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 COL5A2P05997 1499 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 GNG14A0A1W2PPG7 69 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 A0A1W2PQL4 384 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TVP23AA6NH52 213 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ANKRD63C9JTQ0 380 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 H7C417 338 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 K7EN84 100 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ACOX3O15254 700 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TRAF3IP2O43734 574 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 SLC16A7O60669 478 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 SUPT3HO75486 399 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 GCGP01275 180 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 INSP01308 110 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 BGLAPP02818 100 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 GFAPP14136 432 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 HLA-GP17693 338 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 RAB3BP20337 219 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 COILP38432 576 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 CEACAM6P40199 344 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 IDH2P48735 452 aaKnown RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF138P52744 262 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 AP2S1P53680 142 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TAS2R60P59551 318 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 PPP1CBP62140 327 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 CCL7P80098 99 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 C2orf54Q08AI8 447 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 C2orf80Q0P641 193 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TCP10Q12799 353 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TPBGQ13641 420 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 FLOT2Q14254 428 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 MAD2L1BPQ15013 274 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 QPRTQ15274 297 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 POU2AF1Q16633 256 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 PDZD11Q5EBL8 140 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 RBM48Q5RL73 367 aaKnown RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 SLC25A30Q5SVS4 291 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 LPCAT4Q643R3 524 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 DUPD1Q68J44 220 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 DNAJC24Q6P3W2 148 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 AHSA2Q719I0 299 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 H2AFVQ71UI9 128 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 STRADAQ7RTN6 431 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 NT5DC3Q86UY8 548 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ENTHD1Q8IYW4 607 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 HS3ST5Q8IZT8 346 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 STPG2Q8N412 459 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM251Q8N6I4 163 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 NPWQ8N729 165 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 OR51G1Q8NGK1 321 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 OR2Y1Q8NGV0 311 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ACTL9Q8TC94 416 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 DYNC2LI1Q8TCX1 351 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ACTRT1Q8TDG2 376 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 FAM172AQ8WUF8 416 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 AP3S1Q92572 193 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 RORBQ92753 470 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 RDH5Q92781 318 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 HGDQ93099 445 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 NTAN1Q96AB6 310 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF75AQ96N20 296 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF681Q96N22 645 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 GPR21Q99679 349 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TMBIM4Q9HC24 238 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 BATF3Q9NR55 127 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 PLSCR3Q9NRY6 295 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 FGFR1OP2Q9NVK5 253 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 BABAM2Q9NXR7 383 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 MTFP1Q9UDX5 166 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TRMT112Q9UI30 125 aaKnown RBP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 GUCA1BQ9UMX6 200 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 CACNG2Q9Y698 323 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms