RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZNF85Q03923 595 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 MFGE8Q08431 387 aaPredicted RBP7□□□□□ -1.29
PSEN1-223ENST00000557511 ZMYND11Q15326 602 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 MPPED2Q15777 294 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 MICBQ29980 383 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ODF4Q2M2E3 257 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 CR1LQ2VPA4 569 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 SPRNQ5BIV9 151 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 FAM120AOSQ5T036 256 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 OGFRL1Q5TC84 451 aaPredicted RBP7□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF691Q5VV52 312 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 BTNL3Q6UXE8 466 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 DCDC5Q6ZRR9 648 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 SSX6Q7RTT6 188 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 RFLNBQ8N5W9 214 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF676Q8N7Q3 588 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 OR1M1Q8NGA1 313 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 OR5A2Q8NGI9 324 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF671Q8TAW3 534 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 LRRC29Q8WV35 223 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 LGALS12Q96DT0 336 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 C1orf159Q96HA4 380 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 LYZL4Q96KX0 146 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 MRI1Q9BV20 369 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ALG8Q9BVK2 526 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 COMMD4Q9H0A8 199 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 AMBNQ9NP70 447 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ACOXLQ9NUZ1 547 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ERVK-18Q9QC07 812 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 EXOGQ9Y2C4 368 aaKnown RBP7□□□□□ -1.29
PSEN1-223ENST00000557511 LRCH1Q9Y2L9 728 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 HIVEP2P31629 2446 aa7□□□□□ -1.29
PSEN1-223ENST00000557511 ACANP16112 2415 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 OOEPA6NGQ2 149 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 NKX6-3A6NJ46 265 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 DHRS7CA6NNS2 312 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CEACAM18A8MTB9 384 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF732B4DXR9 585 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 DLGAP1O14490 977 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 WNT9BO14905 357 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 PLPP2O43688 288 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF205O95201 554 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 PTBP3O95758 552 aaKnown RBP6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CYB5AP00167 134 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 PNPP00491 289 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CCDC159P0C7I6 412 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 FAM157CP0CG43 387 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 FAHP16930 419 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ACKR3P25106 362 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 DCKP27707 260 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 PSMB10P40306 273 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 PITPNBP48739 271 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 NPY4RP50391 375 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 GPM6AP51674 278 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 LCN2P80188 198 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF154Q13106 437 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 GALEQ14376 348 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CNN3Q15417 329 aaKnown RBP6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CEACAM21Q3KPI0 293 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF404Q494X3 552 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CDONQ4KMG0 1287 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CEP78Q5JTW2 689 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CD276Q5ZPR3 534 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 LHFPL3Q86UP9 236 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CATSPERDQ86XM0 798 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 ZNF573Q86YE8 665 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 SYS1Q8N2H4 156 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 OR10Z1Q8NGY1 313 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 FBLIM1Q8WUP2 373 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 OR5P3Q8WZ94 311 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 C10orf35Q96D05 121 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 C4orf36Q96KX1 117 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 TECTBQ96PL2 329 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 TMEM246Q9BRR3 403 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-223ENST00000557511 TMEM165Q9HC07 324 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 G6PC2Q9NQR9 355 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 DCAF16Q9NXF7 216 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 CLN8Q9UBY8 286 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 SLC22A13Q9Y226 551 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 POLDIP2Q9Y2S7 368 aa6.99□□□□□ -1.29
PSEN1-223ENST00000557511 EXOSC1Q9Y3B2 195 aaKnown RBP6.99□□□□□ -1.29
PSEN1-223ENST00000557511 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
PSEN1-223ENST00000557511 LOC107986453A0A1B0GWG9 222 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 EFCAB10A6NFE3 127 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 ANKRD61A6NGH8 418 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 PRR32B1ATL7 298 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 E9PQ18 207 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 CDIPTO14735 213 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 ADAM20O43506 726 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 SRSF10O75494 262 aaKnown RBP6.98□□□□□ -1.29
PSEN1-223ENST00000557511 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
PSEN1-223ENST00000557511 WNT2P09544 360 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 MUC1P15941 1255 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-223ENST00000557511 GABRB1P18505 474 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 GLRA1P23415 457 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 CD80P33681 288 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 PMELP40967 661 aa6.98□□□□□ -1.29
PSEN1-223ENST00000557511 HSPA13P48723 471 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms