RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ANKRD19PQ9H560 264 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 WDR54Q9H977 334 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 NTN4Q9HB63 628 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 FAM60AQ9NP50 221 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ADAP2Q9NPF8 381 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 FBXO8Q9NRD0 319 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 EXD2Q9NVH0 621 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C14orf105Q9NVL8 296 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 MAT2BQ9NZL9 334 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 MBD2Q9UBB5 411 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 IL20RAQ9UHF4 553 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ENOPH1Q9UHY7 261 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 NXT1Q9UKK6 140 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CFL2Q9Y281 166 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 APC2O95996 2303 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 PTPRQQ9UMZ3 2332 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CFAP54Q96N23 3096 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 RTTNQ86VV8 2226 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 SPTBN2O15020 2390 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 HEATR1Q9H583 2144 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 IGKV2D-24A0A075B6R9 120 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IGHV5-10-1A0A0J9YXX1 117 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 VSTM2BA6NLU5 285 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 DLGAP1O14490 977 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ACOX3O15254 700 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CHST10O43529 356 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 HCRTR1O43613 425 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 B4GALT2O60909 372 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR2B3O76000 313 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TOXO94900 526 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 MFN2O95140 757 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 NDUFA7O95182 113 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CPSF4O95639 269 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 OXSR1O95747 527 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 ZNF682O95780 498 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 SERPINA1P01009 418 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IGF2P01344 180 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 HMGN2P05204 90 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 FABP3P05413 133 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 SERPIND1P05546 499 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 RRASP10301 218 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 THRBP10828 461 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 UQCRBP14927 111 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TCN1P20061 433 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 CHI3L1P36222 383 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 CRATP43155 626 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 HTR5AP47898 357 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CDK9P50750 372 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 XKP51811 444 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 PSMD4P55036 377 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 VSX2P58304 361 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 SMIM11AP58511 58 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 GMFBP60983 142 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 RAB8AP61006 207 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 FUT5Q11128 374 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ZP4Q12836 540 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 EIF3IQ13347 325 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 DGCR6Q14129 220 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TRIP10Q15642 601 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 NRF1Q16656 503 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ARHGAP11BQ3KRB8 267 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ATAD3BQ5T9A4 648 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 MLIPQ5VWP3 458 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 SLX4IPQ5VYV7 408 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 KDM4DQ6B0I6 523 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR2T5Q6IEZ7 315 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ANKRD26P1Q6NSI1 321 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 GUSBP11Q6P575 273 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 BTNL3Q6UXE8 466 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IZUMO2Q6UXV1 221 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ZNF562Q6V9R5 426 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 PRSS41Q7RTY9 318 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IFNEQ86WN2 208 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ZDHHC21Q8IVQ6 265 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CCDC36Q8IYA8 594 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OFCC1Q8IZS5 231 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 DEFB119Q8N690 84 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TPRX1Q8N7U7 411 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR56B1Q8NGI3 324 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR2T29Q8NH02 315 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR8K3Q8NH51 312 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR51Q1Q8NH59 317 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR5K1Q8NHB7 308 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CDC26Q8NHZ8 85 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 FAM110BQ8TC76 370 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 N4BP2L2Q92802 583 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 EXOSC8Q96B26 276 aaKnown RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 TAMM41Q96BW9 452 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 VSTM2LQ96N03 204 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TGM7Q96PF1 710 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 IL4I1Q96RQ9 567 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CCNL2Q96S94 520 aaPredicted RBP2.38□□□□□ -2.03
VRK1-207ENST00000557352 DDA1Q9BW61 102 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 CHID1Q9BWS9 393 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 ANKRD60Q9BZ19 345 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 OR51J1Q9H342 316 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 PIGUQ9H490 435 aa2.38□□□□□ -2.03
VRK1-207ENST00000557352 TRIM45Q9H8W5 580 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms