RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 KRT72Q14CN4 511 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 SNAPC1Q16533 368 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 LCN8Q6JVE9 175 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 PGM2L1Q6PCE3 622 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 THAP5Q7Z6K1 395 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 PATL1Q86TB9 770 aaKnown RBP9.78□□□□□ -0.84
PSEN1-220ENST00000557037 IFT20Q8IY31 132 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 LINC00471Q8N535 108 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 CD177Q8N6Q3 437 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 CYB561A3Q8NBI2 242 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
PSEN1-220ENST00000557037 RETNQ9HD89 108 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 A4GNTQ9UNA3 340 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 CORO2BQ9UQ03 480 aa9.78□□□□□ -0.84
PSEN1-220ENST00000557037 KITP10721 976 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 BRS3P32247 399 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 DDOSTP39656 456 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 CDKN2AP42771 156 aaKnown RBP9.77□□□□□ -0.85
PSEN1-220ENST00000557037 GPR4P46093 362 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 OR1E2P47887 323 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 PRKXP51817 358 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 SLC7A2P52569 658 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 CRYBA2P53672 197 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 ACTA2P62736 377 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 ACTG2P63267 376 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 ACTC1P68032 377 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 ACTA1P68133 377 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 FAM3AP98173 230 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 STX3Q13277 289 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 IL18R1Q13478 541 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 SLC16A9Q7RTY1 509 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 RTL8AQ9BWD3 113 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 NSRP1Q9H0G5 558 aaKnown RBP9.77□□□□□ -0.85
PSEN1-220ENST00000557037 KIAA1456Q9P272 454 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 CYB5R1Q9UHQ9 305 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 B9D1Q9UPM9 204 aa9.77□□□□□ -0.85
PSEN1-220ENST00000557037 RFPL4AA6NLU0 287 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 TRPC5OSA6NMA1 111 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 RFPL4AL1F8VTS6 287 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 CDC42EP2O14613 210 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 UBDO15205 165 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 TBX1O43435 398 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 DEDDO75618 318 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 ZNF823P16415 610 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 RPS27P42677 84 aaKnown RBP9.76□□□□□ -0.85
PSEN1-220ENST00000557037 POU3F4P49335 361 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 NFYCQ13952 458 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 HAGHQ16775 308 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 WHAMMP3Q1A5X7 153 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 ANKDD1AQ495B1 522 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 CBLL1Q75N03 491 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 CCDC80Q76M96 950 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 CALHM1Q8IU99 346 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 KIRREL3Q8IZU9 778 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 FGF23Q9GZV9 251 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-220ENST00000557037 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 C19orf73Q9NVV2 129 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 IER3IP1Q9Y5U9 82 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 GMEB1Q9Y692 573 aa9.76□□□□□ -0.85
PSEN1-220ENST00000557037 SIRT4Q9Y6E7 314 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-220ENST00000557037 ANXA2P2A6NMY6 339 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 M0QZK8 103 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 SAP30O75446 220 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 HLA-DQA2P01906 255 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 FSTP19883 344 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 CNTFRP26992 372 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 HTR1DP28221 377 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 PRKCDQ05655 676 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 SLC36A3Q495N2 470 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 ZBED5Q49AG3 693 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 DNM1P34Q6PK57 102 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 ST6GALNAC6Q969X2 333 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 SPSB4Q96A44 273 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 RNF170Q96K19 258 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 OR52B2Q96RD2 323 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 POLR2J2Q9GZM3 115 aaKnown RBP9.75□□□□□ -0.85
PSEN1-220ENST00000557037 POLR2J3Q9H1A7 115 aaKnown RBP9.75□□□□□ -0.85
PSEN1-220ENST00000557037 PAPOLBQ9NRJ5 636 aaKnown RBP9.75□□□□□ -0.85
PSEN1-220ENST00000557037 RHCGQ9UBD6 479 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 MOB4Q9Y3A3 225 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
PSEN1-220ENST00000557037 IGHV2-26A0A0B4J1V2 119 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 HTR3EA5X5Y0 456 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 TMEM210A6NLX4 147 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 ZNF850A8MQ14 1090 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 SLC1A7O00341 560 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 BIRC5O15392 142 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 XRCC2O43543 280 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
PSEN1-220ENST00000557037 TROVE2P10155 538 aaKnown RBP eCLIP9.74□□□□□ -0.85
PSEN1-220ENST00000557037 CRABP1P29762 137 aa9.74□□□□□ -0.85
PSEN1-220ENST00000557037 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-220ENST00000557037 MTNR1BP49286 362 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms