RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OOEPA6NGQ2 149 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 OR5B21A6NL26 309 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 SERPINA3P01011 423 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 RPSAP08865 295 aaKnown RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 HTR1AP08908 422 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 RPS2P15880 293 aaKnown RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 ZFP36P26651 326 aaKnown RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 KIR3DL2P43630 455 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 GPM6AP51674 278 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 LCN2P80188 198 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 MICBQ29980 383 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 ESCO2Q56NI9 601 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 DCAF12L2Q5VW00 463 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 PLCXD3Q63HM9 321 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 TMEM42Q69YG0 159 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 FAHD2BQ6P2I3 314 aaPredicted RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 WDR82Q6UXN9 313 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 NLRC3Q7RTR2 1065 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 SCCPDHQ8NBX0 429 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 C19orf18Q8NEA5 215 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 OR8B3Q8NGG8 313 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 ZNF671Q8TAW3 534 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 LRRC29Q8WV35 223 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 RPL3LQ92901 407 aaKnown RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 FAHD2AQ96GK7 314 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 OR8B2Q96RD0 313 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 SSBP3Q9BWW4 388 aaPredicted RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 VCX3BQ9H321 246 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 OR51I2Q9H344 312 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 METTL17Q9H7H0 456 aaPredicted RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 ISG20L2Q9H9L3 353 aaKnown RBP8.94□□□□□ -0.98
LINC00239-201ENST00000556973 ZANQ9Y493 2812 aa8.94□□□□□ -0.98
LINC00239-201ENST00000556973 A0A0G2JMP0 313 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 A0A0X1KG70 313 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 A6NIN4 97 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 A8MXK9 166 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 SRRM5B3KS81 715 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 C3orf80F5H4A9 247 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 J3QLI3 93 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TNFRSF13BO14836 293 aaPredicted RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 IFNA2P01563 188 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 GNAO1P09471 354 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 FAM157CP0CG43 387 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 LIMS3P0CW19 117 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 LIMS4P0CW20 117 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 MUC1P15941 1255 aaPredicted RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 NPY4RP50391 375 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 GBX2P52951 348 aaPredicted RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 NANOS3P60323 173 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 GNB2P62879 340 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 CSNK2BP67870 215 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 MED21Q13503 144 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 ALKBH1Q13686 389 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TEX36Q5VZQ5 186 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 LYPD2Q6UXB3 125 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TMPRSS11AQ6ZMR5 421 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 RDH10Q8IZV5 341 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TEX29Q8N6K0 151 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 OR4M2Q8NGB6 313 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 FBLIM1Q8WUP2 373 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 NRG4Q8WWG1 115 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 GGHQ92820 318 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 C12orf43Q96C57 262 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TMEM80Q96HE8 168 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 TECTBQ96PL2 329 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 FGF23Q9GZV9 251 aaPredicted RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 PLEKHA1Q9HB21 404 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 GPR173Q9NS66 373 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 CHCHD3Q9NX63 227 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 DIMT1Q9UNQ2 313 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 CAB39Q9Y376 341 aaPredicted RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 EXOSC1Q9Y3B2 195 aaKnown RBP8.93□□□□□ -0.98
LINC00239-201ENST00000556973 ABCA2Q9BZC7 2435 aa8.93□□□□□ -0.98
LINC00239-201ENST00000556973 EFCAB10A6NFE3 127 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 OR4C45A6NMZ5 311 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 TRAPPC2LH3BP13 241 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 GATBO75879 557 aaKnown RBP8.92□□□□□ -0.98
LINC00239-201ENST00000556973 GYPAP02724 150 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 PIPP12273 146 aaPredicted RBP8.92□□□□□ -0.98
LINC00239-201ENST00000556973 EGR1P18146 543 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 SRD5A1P18405 259 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 MYL12AP19105 171 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 CD80P33681 288 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 TGM4P49221 684 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 ETV1P50549 477 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 SEC61A1P61619 476 aaKnown RBP8.92□□□□□ -0.98
LINC00239-201ENST00000556973 HOXA4Q00056 320 aaPredicted RBP8.92□□□□□ -0.98
LINC00239-201ENST00000556973 RIPK1Q13546 671 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 KRTAP21-3Q3LHN1 58 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 ZNF841Q6ZN19 808 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 IL17RELQ6ZVW7 336 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 FAM90A1Q86YD7 464 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 ZNF573Q86YE8 665 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 ZNF676Q8N7Q3 588 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 PP6455Q8WZ26 134 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 AQP3Q92482 292 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 C7orf69Q9H7B7 122 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 PLCXD1Q9NUJ7 323 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 RASL12Q9NYN1 266 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms