RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OPN1MW3P0DN78 364 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 BLMHQ13867 455 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 LY6EQ16553 131 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 MICAQ29983 383 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 SHFQ7M4L6 423 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 ZDHHC23Q8IYP9 409 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 DEFB107AQ8IZN7 70 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 IQCF1Q8N6M8 205 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 OR4C13Q8NGP0 309 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 RORBQ92753 470 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 OTULINQ96BN8 352 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 AJUBAQ96IF1 538 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 RNF170Q96K19 258 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 SSX3Q99909 188 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 MED4Q9NPJ6 270 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 FOXJ3Q9UPW0 622 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 MAB21L2Q9Y586 359 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 U3KQV3 271 aa14.91□□□□□ -0.02
VIPAS39-209ENST00000556909 IGKV1D-17A0A075B6S4 117 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 ANGPTL7O43827 346 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 SNX3O60493 162 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 RHBDL1O75783 438 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 GLRA1P23415 457 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 POU1F1P28069 291 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 KIR2DS4P43632 304 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 GABRA2P47869 451 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 SPATS1Q496A3 300 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 FBLN7Q53RD9 439 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 SAMD5Q5TGI4 173 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 C11orf88Q6PI97 169 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 KLHDC1Q8N7A1 406 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 C11orf44Q8N8P7 122 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 OR51G2Q8NGK0 314 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 OR5D13Q8NGL4 314 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 TEX47Q8TBZ9 253 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 CFHR4Q92496 578 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 PIGCQ92535 297 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 ARL8BQ9NVJ2 186 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 ACTR3BQ9P1U1 418 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 TAGLN3Q9UI15 199 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 ZNF222Q9UK12 451 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 SF3B6Q9Y3B4 125 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 SAMHD1Q9Y3Z3 626 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 NOTCH3Q9UM47 2321 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 DNAH3Q8TD57 4116 aa14.9□□□□□ -0.02
VIPAS39-209ENST00000556909 TRBV23-1A0A0A0MS06 115 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 TCRBV5S2A0A599 114 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 H0YAE9 185 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 SELENOFO60613 162 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 LYNP07948 512 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 PSMA6P60900 246 aaKnown RBP14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 LRRC75BQ2VPJ9 315 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 CRIP3Q6Q6R5 217 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 C16orf89Q6UX73 402 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 CPLX4Q7Z7G2 160 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 FAM185AQ8N0U4 392 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 ZNRF1Q8ND25 227 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 TMEM185AQ8NFB2 350 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 OR8B12Q8NGG6 310 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 OTOSQ8NHW6 89 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 NIPSNAP1Q9BPW8 284 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 FAM234AQ9H0X4 552 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 OR51V1Q9H2C8 321 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 MAGIXQ9H6Y5 334 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 RANBP3Q9H6Z4 567 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 REEP1Q9H902 201 aa14.89□□□□□ -0.03
VIPAS39-209ENST00000556909 PRB2P02812 416 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 PSG2P11465 335 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 PAX6P26367 422 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 GPM6AP51674 278 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 OR2T5Q6IEZ7 315 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 PAPD5Q8NDF8 572 aaKnown RBP14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 OR10G2Q8NGC3 310 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 OR2T29Q8NH02 315 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 OR2T6Q8NHC8 308 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 MEGF9Q9H1U4 602 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 OR51I2Q9H344 312 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 C19orf12Q9NSK7 152 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 NDE1Q9NXR1 346 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 KLHDC2Q9Y2U9 406 aa14.88□□□□□ -0.03
VIPAS39-209ENST00000556909 MEGF11A6BM72 1044 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 H3BN98 237 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 CHST1O43916 411 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 AANATQ16613 207 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 CD300LDQ6UXZ3 194 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 Q6ZPA2 131 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 MKXQ8IYA7 352 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 ZNF454Q8N9F8 522 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 THEM6Q8WUY1 208 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 SDSLQ96GA7 329 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 CLPTM1LQ96KA5 538 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 HIST1H2AAQ96QV6 131 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 RAB18Q9NP72 206 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 TAS2R1Q9NYW7 299 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 LRP12Q9Y561 859 aa14.87□□□□□ -0.03
VIPAS39-209ENST00000556909 DSCAML1Q8TD84 2053 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 ZNF732B4DXR9 585 aa14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 PAICSP22234 425 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-209ENST00000556909 GNG3P63215 75 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms