RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 LGALS8O00214 317 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 TNFRSF13BO14836 293 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 MRPS14O60783 128 aaKnown RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 LHBP01229 141 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 IGLV3-1P01715 115 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 HSMCR30P0CW71 290 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 IRF2P14316 349 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 CFL1P23528 166 aaKnown RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 DCKP27707 260 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 PSMB9P28065 219 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 C21orf33P30042 268 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 PITPNBP48739 271 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 GNB2P62879 340 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 ROM1Q03395 351 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 PAX8Q06710 450 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 SCGB2A2Q13296 93 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 WDR25Q64LD2 544 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 USP43Q70EL4 1123 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 SPARTQ8N0X7 666 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 OR8B3Q8NGG8 313 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 HPSE2Q8WWQ2 592 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 RORBQ92753 470 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 ITPKCQ96DU7 683 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 OR8B2Q96RD0 313 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 TLNRD1Q9H1K6 362 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 DUSP21Q9H596 190 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 NIPAL2Q9H841 368 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 SMURF1Q9HCE7 757 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 C14orf119Q9NWQ9 140 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 LAMP5Q9UJQ1 280 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 DIMT1Q9UNQ2 313 aaKnown RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 EXOSC1Q9Y3B2 195 aaKnown RBP8.6□□□□□ -1.03
SHMT2-224ENST00000556737 RHBDD3Q9Y3P4 386 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 AUP1Q9Y679 476 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 TENM1Q9UKZ4 2725 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 OOEPA6NGQ2 149 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 PSMD9O00233 223 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 PHYHO14832 338 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 SRSF10O75494 262 aaKnown RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 GRPP07492 148 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 HTR1AP08908 422 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ACTC1P68032 377 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ACTA1P68133 377 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 MFGE8Q08431 387 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 BLMHQ13867 455 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 MED22Q15528 200 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ARMCX4Q5H9R4 360 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 TEX36Q5VZQ5 186 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 SFRP4Q6FHJ7 346 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 DEGS2Q6QHC5 323 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 WDR82Q6UXN9 313 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 NLRC3Q7RTR2 1065 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 KRT74Q7RTS7 529 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 KRT77Q7Z794 578 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 LHFPL3Q86UP9 236 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 FAM90A1Q86YD7 464 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ACBD7Q8N6N7 88 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 CSNK2A3Q8NEV1 391 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 OR1M1Q8NGA1 313 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 OR8S1Q8NH09 359 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF418Q8TF45 676 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ZFAND2BQ8WV99 257 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 C22orf15Q8WYQ4 148 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 MRPL48Q96GC5 212 aaKnown RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 OR8B4Q96RC9 309 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 PAPOLGQ9BWT3 736 aaKnown RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 MND1Q9BWT6 205 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 ADGRL4Q9HBW9 690 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 FGF20Q9NP95 211 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 CLN8Q9UBY8 286 aa8.59□□□□□ -1.03
SHMT2-224ENST00000556737 EXOGQ9Y2C4 368 aaKnown RBP8.59□□□□□ -1.03
SHMT2-224ENST00000556737 A0A0U1RQV5 110 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 A0A1B0GW55 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 CCDC160A6NGH7 325 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 A6NLC8 198 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 CST4P01036 141 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L2P0CJ85 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L3P0CJ86 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L4P0CJ87 422 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L5P0CJ88 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L6P0CJ89 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L7P0CJ90 424 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 PPIAL4GP0DN37 164 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 IGHV4-38-2P0DP08 117 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DCTDP32321 178 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 RPL5P46777 297 aaKnown RBP8.58□□□□□ -1.04
SHMT2-224ENST00000556737 ETV1P50549 477 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 EMX1Q04741 257 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-224ENST00000556737 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 PRDX4Q13162 271 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 TBCEQ15813 527 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-224ENST00000556737 DUX4L9Q6RFH8 374 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-224ENST00000556737 TMPRSS11AQ6ZMR5 421 aa8.58□□□□□ -1.04
SHMT2-224ENST00000556737 FAM220AQ7Z4H9 259 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms