RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TNFSF18Q9UNG2 199 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 SIGLEC7Q9Y286 467 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 LAMTOR2Q9Y2Q5 125 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 PHIPQ8WWQ0 1821 aa5.46□□□□□ -1.54
TDP1-215ENST00000556498 FMN2Q9NZ56 1722 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TOPAZ1Q8N9V7 1692 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TRAV19A0A0A6YYK7 116 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 IGHV1-69-2A0A0G2JMI3 117 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 OR2M5A3KFT3 312 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 NAP1L6A6NFF2 107 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 UNC119BA6NIH7 251 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 F5H5T6 163 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 F5H768 121 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SULT2B1O00204 365 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TNFRSF13BO14836 293 aaPredicted RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 SLC16A7O60669 478 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 IL5P05113 134 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 PRSS56P0CW18 603 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 HTR1EP28566 365 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 GABRA5P31644 462 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 RPL22P35268 128 aaKnown RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 KIR2DS4P43632 304 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 RGRP47804 291 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SULT1A1P50225 295 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SULT1A2P50226 295 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 DVL1P1P54792 670 aaPredicted RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 CLRN1P58418 232 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 RHOBP62745 196 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 HSD52Q0P140 79 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 EDDM3AQ14507 147 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 BATFQ16520 125 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ACKR1Q16570 336 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SRSF7Q16629 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
TDP1-215ENST00000556498 SMN1Q16637 294 aaKnown RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 GSG1Q2KHT4 349 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ZNF766Q5HY98 468 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TMEM78Q5T7P6 136 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 CPTPQ5TA50 214 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ZNF57Q68EA5 555 aaPredicted RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 ASPHD2Q6ICH7 369 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SLC27A1Q6PCB7 646 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 CBLN3Q6UW01 205 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 FAM24BQ8N5W8 94 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ARIH2OSQ8N7S6 290 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 BMPERQ8N8U9 685 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 NPEPL1Q8NDH3 523 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 OR5AU1Q8NGC0 362 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 OR4N2Q8NGD1 307 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 OR4K1Q8NGD4 311 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 RXFP2Q8WXD0 754 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SLC25A46Q96AG3 418 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 YPEL4Q96NS1 127 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 IMMP2LQ96T52 175 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 DDOQ99489 341 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 HSPB9Q9BQS6 159 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 DOHHQ9BU89 302 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 AMBRA1Q9C0C7 1298 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 SLC39A8Q9C0K1 460 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 GPR35Q9HC97 309 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 A4GALTQ9NPC4 353 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 ARL15Q9NXU5 204 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 FOXA2Q9Y261 457 aaPredicted RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 MRPS28Q9Y2Q9 187 aaKnown RBP5.45□□□□□ -1.54
TDP1-215ENST00000556498 WNT6Q9Y6F9 365 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 V9GYY9 64 aa5.45□□□□□ -1.54
TDP1-215ENST00000556498 TP53BP1Q12888 1972 aaPredicted RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 A0A0G2JMM0 328 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 A0A1B0GTL3 188 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PPB8 328 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LRP5LA4QPB2 252 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 MAP1LC3B2A6NCE7 125 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 KIR3DP1A8MWS1 328 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 E9PQ18 207 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 DNPH1O43598 174 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 FGF17O60258 216 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ENTPD6O75354 484 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 EDN1P05305 212 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 CA3P07451 260 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 RHOCP08134 193 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 SFTA3P0C7M3 94 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 LAMP1P11279 417 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ERGP11308 486 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 CXCL3P19876 107 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 NMBRP28336 390 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 SOX3P41225 446 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 PNPLA4P41247 253 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 XCR1P46094 333 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 AMTP48728 403 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 FOXG1P55316 489 aaPredicted RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 PAX9P55771 341 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 ARHGAP1Q07960 439 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 FOXE3Q13461 319 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 IL10RAQ13651 578 aa5.44□□□□□ -1.54
TDP1-215ENST00000556498 RBM39Q14498 530 aaKnown RBP5.44□□□□□ -1.54
TDP1-215ENST00000556498 OR1Q1Q15612 314 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms