RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 NOTCH3Q9UM47 2321 aa8.21□□□□□ -1.09
SCFD1-220ENST00000556486 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.09
SCFD1-220ENST00000556486 BHLHE40O14503 412 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 ADAM20O43506 726 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 OR10H3O60404 316 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 GMNNO75496 209 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 ACTL6BO94805 426 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 MUC1P15941 1255 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF823P16415 610 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 ANOS1P23352 680 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 IER3P46695 156 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 CDONQ4KMG0 1287 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 LINC00471Q8N535 108 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 ZSCAN4Q8NAM6 433 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 LY6G5BQ8NDX9 201 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 SDR9C7Q8NEX9 313 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 OR2T4Q8NH00 348 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 NPRL2Q8WTW4 380 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 C12orf43Q96C57 262 aaKnown RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 NMNAT2Q9BZQ4 307 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 NSRP1Q9H0G5 558 aaKnown RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 RNPEPL1Q9HAU8 725 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 DNAJB11Q9UBS4 358 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 RPUSD1Q9UJJ7 312 aaKnown RBP8.21□□□□□ -1.1
SCFD1-220ENST00000556486 CDH10Q9Y6N8 788 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 COMMD3-BMI1R4GMX3 469 aa8.21□□□□□ -1.1
SCFD1-220ENST00000556486 A0A1B0GVI7 797 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 A0A1W2PRD5 423 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 A0A1W2PRF3 423 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 A0A1W2PRM7 423 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 M0QYG6 137 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 XRCC2O43543 280 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 TIPRLO75663 272 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 KRT36O76013 467 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 HLA-DQA2P01906 255 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 PSKH1P11801 424 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 SPIBQ01892 262 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 SPATS1Q496A3 300 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 GLYATL3Q5SZD4 288 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 SFRP4Q6FHJ7 346 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF770Q6IQ21 691 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF529Q6P280 563 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 ZDHHC21Q8IVQ6 265 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 LNX2Q8N448 690 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 OR56B2PQ8NGI1 322 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 OR2AE1Q8NHA4 323 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 NUDT11Q96G61 164 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 TINAGL1Q9GZM7 467 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-220ENST00000556486 TLNRD1Q9H1K6 362 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 FN3KQ9H479 309 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 C1orf123Q9NWV4 160 aa8.2□□□□□ -1.1
SCFD1-220ENST00000556486 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 LOC102723971A0A1B0GUV8 181 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 GGT3PA6NGU5 568 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF878C9JN71 531 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-220ENST00000556486 DVL1O14640 695 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 FABP3P05413 133 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 RRM2P31350 389 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 GRK5P34947 590 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 RPS27P42677 84 aaKnown RBP8.19□□□□□ -1.1
SCFD1-220ENST00000556486 MAGEA2P43356 314 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ENTPD1P49961 510 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 BLVRAP53004 296 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 SLC25A1P53007 311 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 DLX1P56177 255 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 OR8B8Q15620 311 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ATPAF1Q5TC12 328 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-220ENST00000556486 SLC35E4Q6ICL7 350 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 GDPGP1Q6ZNW5 385 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 Q6ZTK2 550 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 RASSF6Q6ZTQ3 369 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 BTN2A1Q7KYR7 527 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 PRSS45Q7RTY3 260 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 WDR86Q86TI4 376 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 CCDC28AQ8IWP9 274 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 C11orf53Q8IXP5 236 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 BOLLQ8N9W6 283 aaKnown RBP8.19□□□□□ -1.1
SCFD1-220ENST00000556486 CYB561A3Q8NBI2 242 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 PROKR2Q8NFJ6 384 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 OR52L1Q8NGH7 329 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 C8orf46Q8TAG6 207 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ZNRF4Q8WWF5 429 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 MCUR1Q96AQ8 359 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 PHF21AQ96BD5 680 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 DNTTIP1Q9H147 329 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 OR10A2Q9H208 303 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 DPAGT1Q9H3H5 408 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 EGLN3Q9H6Z9 239 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms