RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TP53I11O14683 189 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RS1O15537 224 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ICOSLGO75144 302 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 NUDT14O95848 222 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TXNDC12O95881 172 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 HLA-DPB1P04440 258 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ICAM2P13598 275 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ZNF12P17014 697 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 CCNOP22674 350 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 CFL1P23528 166 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 GADD45AP24522 165 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 CD40LGP29965 261 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 FGF9P31371 208 aaPredicted RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 RPL4P36578 427 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 KCNJ3P48549 501 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RORCP51449 518 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 POLR2HP52434 150 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 VBP1P61758 197 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ACTA2P62736 377 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ACTG2P63267 376 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 MYBPHQ13203 477 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 AQP6Q13520 282 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 KRR1Q13601 381 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 TPBGQ13641 420 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 PON3Q15166 354 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 NNATQ16517 81 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ZNF404Q494X3 552 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 PWWP2BQ6NUJ5 590 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ZNF841Q6ZN19 808 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 DPY19L4Q7Z388 723 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 GRINAQ7Z429 371 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 COMMD2Q86X83 199 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 PRSS58Q8IYP2 241 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 GABRG1Q8N1C3 465 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 SLC37A3Q8NCC5 494 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 NFAM1Q8NET5 270 aaPredicted RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 OR4Q3Q8NH05 313 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 OR51A7Q8NH64 312 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 MCFD2Q8NI22 146 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 AP3S1Q92572 193 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 CXorf58Q96LI9 332 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 OPALINQ96PE5 141 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ERMAPQ96PL5 475 aaPredicted RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 OR5M11Q96RB7 305 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TNFRSF13CQ96RJ3 184 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TEAD3Q99594 435 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 MED18Q9BUE0 208 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 TAPBPLQ9BX59 468 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 DEFB126Q9BYW3 111 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RAB1BQ9H0U4 201 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RANBP3Q9H6Z4 567 aaPredicted RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 EXOSC4Q9NPD3 245 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 NANSQ9NR45 359 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 ATPIF1Q9UII2 106 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 PITPNC1Q9UKF7 332 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 RBMX2Q9Y388 322 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 LOXL2Q9Y4K0 774 aa4.42□□□□□ -1.7
SRP54-211ENST00000556445 SPIN1Q9Y657 262 aaPredicted RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
SRP54-211ENST00000556445 TECTAO75443 2155 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 HEATR5AQ86XA9 2040 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ADAMTS9Q9P2N4 1935 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TRAV27A0A087WT01 109 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TRDV1A0A1B0GX56 115 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 SMCO3A2RU48 225 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 METTL15A6NJ78 407 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 A8MVM7 634 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ZNF670-ZNF695F2Z2N8 137 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LOC110117498-PIK3R3F6TDL0 507 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 P2RY10O00398 339 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 PHYHO14832 338 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 FADS1O60427 444 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 AHSA1O95433 338 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 PPP1R3DO95685 299 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 RENP00797 406 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 CD14P08571 375 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LIMS3P0CW19 117 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LIMS4P0CW20 117 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 NQO2P16083 231 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 F8A1P23610 371 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 SLC25A1P53007 311 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 GAS1P54826 345 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 DLX5P56178 289 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 CLDN20P56880 219 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 FXYD6P3P58550 94 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TSPAN5P62079 268 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 NCS1P62166 190 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LSM3P62310 102 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 RPS4XP62701 263 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 NAAAQ02083 359 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ZNF45Q02386 682 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ZNF117Q03924 483 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 EIF3IQ13347 325 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 SNTA1Q13424 505 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TAF13Q15543 124 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 CD226Q15762 336 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ZNF74Q16587 644 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms