RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LY6G6EA0A0G2JKS1 128 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RPS10-NUDT3A0A1W2PQS6 291 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TRDCB7Z8K6 153 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 D6RAR5 112 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 K7EP13 123 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 FABP7O15540 132 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SPRY1O43609 319 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 GDF9O60383 454 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TUSC2O75896 110 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TBPP20226 339 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PSMB10P40306 273 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PPICP45877 212 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 EBPQ15125 230 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 MRPL23Q16540 153 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TAF9Q16594 264 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 WDR74Q6RFH5 385 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 UQCC3Q6UW78 93 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RPTNQ6XPR3 784 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ACOT7LQ6ZUV0 252 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 KANSL1Q7Z3B3 1105 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 HSD17B13Q7Z5P4 300 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ATG4DQ86TL0 474 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 OR51S1Q8NGJ8 323 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM186Q96B77 213 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZBTB8AQ96BR9 441 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 OR8D2Q9GZM6 311 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RNF121Q9H920 327 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PRODH2Q9UF12 536 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PSG11Q9UQ72 335 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 U3KQA8 63 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PTPRZ1P23471 2315 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RALGAPA1Q6GYQ0 2036 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 CDC14CA4D256 554 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FRG2CA6NGY1 282 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 B4DXG7 233 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 H2AFB1P0C5Y9 115 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 HCCSP53701 268 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NDUFA6P56556 154 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR12D2P58182 307 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LTBQ06643 244 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FAM27D1Q5T7N8 215 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 HIST2H3PS2Q5TEC6 136 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR52W1Q6IF63 320 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LYPD4Q6UWN0 246 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 COX15Q7KZN9 410 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LYG2Q86SG7 212 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 CALHM1Q8IU99 346 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NAXDQ8IW45 347 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PRR22Q8IZ63 422 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 Q8N402 240 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SLC38A9Q8NBW4 561 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NPEPL1Q8NDH3 523 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR4K13Q8NH42 304 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NEIL3Q8TAT5 605 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NUBPLQ8TB37 319 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 C4orf36Q96KX1 117 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SLC46A1Q96NT5 459 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 MRPL13Q9BYD1 178 aaKnown RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NMNAT2Q9BZQ4 307 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ABCG5Q9H222 651 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 UBQLN4Q9NRR5 601 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ASB6Q9NWX5 421 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZDHHC8Q9ULC8 765 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 CMAHPQ9Y471 501 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 V9GYS6 101 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FREM3P0C091 2139 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 KIF26BQ2KJY2 2108 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FAM230AA0A1W2PPH8 454 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 RIIAD1A6NNX1 92 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 E5RGE8 158 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 F8WDY8 70 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 MAGEB4O15481 346 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 XRCC2O43543 280 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PLPP2O43688 288 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NDUFB2O95178 105 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SIX6O95475 246 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 HLA-DPB1P04440 258 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SYPP08247 313 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 RFX2P48378 723 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 GGTLC2Q14390 218 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ELAVL1Q15717 326 aaKnown RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZSWIM7Q19AV6 140 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PLAC9Q5JTB6 97 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 STEAP1BQ6NZ63 245 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 TMPRSS11AQ6ZMR5 421 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PLXDC1Q8IUK5 500 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LRRC75AQ8NAA5 344 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR52E2Q8NGJ4 325 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR10R2Q8NGX6 335 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 RNF166Q96A37 237 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 RPUSD4Q96CM3 377 aaKnown RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LCORQ96JN0 433 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR2M2Q96R28 347 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 GPX7Q96SL4 187 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ADOQ96SZ5 270 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ATF6BQ99941 703 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms