RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 A8MUI8 341 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NPIPA7E9PJI5 369 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 KLRC4-KLRK1H3BQV0 150 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 BTN3A3O00478 584 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ARPC3O15145 178 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 TM9SF1O15321 606 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 LCMT2O60294 686 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NME2P1O60361 137 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 DPM1O60762 260 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 CTNSO60931 367 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 POP7O75817 140 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ACTL6AO96019 429 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GUSBP08236 651 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 H2AFZP0C0S5 128 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NPIPA8P0DM63 369 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PNMTP11086 282 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 LAMP1P11279 417 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PVRP15151 417 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 TCN2P20062 427 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 DPP4P27487 766 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PEBP1P30086 187 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 CHI3L1P36222 383 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 TGFBR2P37173 567 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 FDFT1P37268 417 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 OMPP47874 163 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GABRA4P48169 554 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ZNF140P52738 457 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 OR2B6P58173 313 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 HPCAP84074 193 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 IRF8Q02556 426 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 HSF2Q03933 536 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PDE7AQ13946 482 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 P2RY14Q15391 338 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ZIC1Q15915 447 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GUK1Q16774 197 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 IMPG1Q17R60 797 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 BSXQ3C1V8 233 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 SLX4IPQ5VYV7 408 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 LRRC74BQ6ZQY2 392 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 H2AFVQ71UI9 128 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 HDDC2Q7Z4H3 204 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 DPPA2Q7Z7J5 298 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NT5DC3Q86UY8 548 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PIANPQ8IYJ0 282 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GCNT2Q8N0V5 402 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 OR13C4Q8NGS5 318 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 OR2L8Q8NGY9 312 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 OR6X1Q8NH79 312 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 FBXO25Q8TCJ0 367 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 BLOC1S5Q8TDH9 187 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ULK4Q96C45 1275 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 RAB3CQ96E17 227 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 RNF145Q96MT1 663 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 RILPQ96NA2 401 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 SPAG8Q99932 426 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ZNF559Q9BR84 538 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 SLC30A2Q9BRI3 323 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 C7orf50Q9BRJ6 194 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NAT9Q9BTE0 207 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NUDT9Q9BW91 350 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 PRRG3Q9BZD7 231 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 SLC19A3Q9BZV2 496 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NAT10Q9H0A0 1025 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 CXXC4Q9H2H0 198 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 FAM96AQ9H5X1 160 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 NHEJ1Q9H9Q4 299 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 Q9HAA7 133 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 LPAR2Q9HBW0 351 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ZNF160Q9HCG1 818 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 IMP3Q9NV31 184 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 GIN1Q9NXP7 522 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 USE1Q9NZ43 259 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ADA2Q9NZK5 511 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 CCDC59Q9P031 241 aaKnown RBP3.28□□□□□ -1.88
PRPF39-209ENST00000556353 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ONECUT1Q9UBC0 465 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 BTNL2Q9UIR0 455 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 C3orf18Q9UK00 162 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 RASD1Q9Y272 281 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 BTRCQ9Y297 605 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 ARL2BPQ9Y2Y0 163 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 DHRS7Q9Y394 339 aa3.28□□□□□ -1.88
PRPF39-209ENST00000556353 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ARID1AO14497 2285 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FBN3Q75N90 2809 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 IGLV3-16A0A075B6K0 115 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 A0A087X0K7 114 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 GLYATL1P3A0A0U1RQE8 302 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SLC5A10A0PJK1 596 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FABP12A6NFH5 140 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 TLCD2A6NGC4 264 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR51F1A6NGY5 319 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 LINC00587B1AMM8 73 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 C9JVG2 144 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SGK494L7N484 410 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 TXNDC9O14530 226 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 BCKDKO14874 412 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms