RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 GNG3P63215 75 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF85Q03923 595 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF91Q05481 1191 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 FAM76BQ5HYJ3 339 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 TEX36Q5VZQ5 186 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 SFRP4Q6FHJ7 346 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 Q6ZSR3 168 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 ENTHD1Q8IYW4 607 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 PPP1R14AQ96A00 147 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 DACT3Q96B18 629 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 HIST1H2AAQ96QV6 131 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 FGF23Q9GZV9 251 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 C8orf4Q9NR00 106 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 FAM118AQ9NWS6 357 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 SMPD3Q9NY59 655 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 CLN8Q9UBY8 286 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 OPN4Q9UHM6 478 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 ENPP5Q9UJA9 477 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 PIGLQ9Y2B2 252 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 INSIG2Q9Y5U4 225 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 IGHV2-70DA0A0C4DH43 119 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 A0A1B0GTI1 187 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-205ENST00000556310 P2RY10O00398 339 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 CDIPTO14735 213 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 FSHBP01225 129 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 MUC1P15941 1255 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-205ENST00000556310 ADRA2CP18825 462 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 NPY4RP50391 375 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 GPM6AP51674 278 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 PAX2Q02962 417 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 RCN1Q15293 331 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 CEACAM21Q3KPI0 293 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 PLCXD3Q63HM9 321 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 WDR25Q64LD2 544 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-205ENST00000556310 TMEM42Q69YG0 159 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 KCTD8Q6ZWB6 473 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 DOK3Q7L591 496 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 CATSPERDQ86XM0 798 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 OR10Z1Q8NGY1 313 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 RHOXF1Q8NHV9 184 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 NANPQ8TBE9 248 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 RORBQ92753 470 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 RPL3LQ92901 407 aaKnown RBP9.61□□□□□ -0.87
SLIRP-205ENST00000556310 C12orf43Q96C57 262 aaKnown RBP9.61□□□□□ -0.87
SLIRP-205ENST00000556310 RNF170Q96K19 258 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 Q96MT0 163 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 MDFIQ99750 246 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 MRI1Q9BV20 369 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 GNG8Q9UK08 70 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 SLC22A13Q9Y226 551 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 PCDHGB1Q9Y5G3 927 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 V9GYS6 101 aa9.61□□□□□ -0.87
SLIRP-205ENST00000556310 A0A1B0GVI7 797 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 DAPL1A0PJW8 107 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 DLGAP1O14490 977 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 TNFRSF13BO14836 293 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ADAM20O43506 726 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 TCF21O43680 179 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 NRASP01111 189 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 GYPAP02724 150 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 UBCP0CG48 685 aaKnown RBP9.6□□□□□ -0.87
SLIRP-205ENST00000556310 DBTP11182 482 aaKnown RBP9.6□□□□□ -0.87
SLIRP-205ENST00000556310 EPHA1P21709 976 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ACTA2P62736 377 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ACTG2P63267 376 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 MICBQ29980 383 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 TP53I3Q53FA7 332 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 CEP78Q5JTW2 689 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 CLVS2Q5SYC1 327 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 BTNL3Q6UXE8 466 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 KCTD20Q7Z5Y7 419 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ACBD7Q8N6N7 88 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 PACRGLQ8N7B6 248 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 SCCPDHQ8NBX0 429 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 CCDC54Q8NEL0 328 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF555Q8NEP9 628 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 OR5A2Q8NGI9 324 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 OR14K1Q8NGZ2 314 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 RAB40AQ8WXH6 277 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 LGALS12Q96DT0 336 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 TECTBQ96PL2 329 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 ERVK-18Q9QC07 812 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 KAAG1Q9UBP8 84 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 AASSQ9UDR5 926 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 EXOGQ9Y2C4 368 aaKnown RBP9.6□□□□□ -0.87
SLIRP-205ENST00000556310 AUP1Q9Y679 476 aa9.6□□□□□ -0.87
SLIRP-205ENST00000556310 IGHV3OR15-7A0A075B7D8 119 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF732B4DXR9 585 aa9.59□□□□□ -0.87
SLIRP-205ENST00000556310 EREGO14944 169 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms