RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OR5D18Q8NGL1 313 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 OR1S2Q8NGQ3 325 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 OR14K1Q8NGZ2 314 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 OR13G1Q8NGZ3 307 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 NPRL2Q8WTW4 380 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 EMG1Q92979 244 aaKnown RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 SPTSSAQ969W0 71 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 CCDC74BQ96LY2 380 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 NAA11Q9BSU3 229 aaPredicted RBP6.15□□□□□ -1.42
TDP1-213ENST00000555880 ZNF319Q9P2F9 582 aa6.15□□□□□ -1.42
TDP1-213ENST00000555880 LAMA1P25391 3075 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 IGKV1-9A0A0C4DH69 117 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 A0A1W2PP11 408 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 TMEM218A2RU14 115 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 STMND1H3BQB6 276 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 TAAR5O14804 337 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RAMP1O60894 148 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 CA11O75493 328 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 ADAP1O75689 374 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 IFNA2P01563 188 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 HPNP05981 417 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 PI3P19957 117 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 SERPINA2P20848 420 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 EPHA8P29322 1005 aaPredicted RBP6.15□□□□□ -1.43
TDP1-213ENST00000555880 RBMXP38159 391 aaKnown RBP6.15□□□□□ -1.43
TDP1-213ENST00000555880 TMEM50BP56557 158 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 S100A10P60903 97 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 CCL7P80098 99 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 CLN3Q13286 438 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 SMCO1Q147U7 214 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 C10orf128Q5T292 105 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 PDSS1Q5T2R2 415 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RAET1LQ5VY80 246 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 NSUN5P2Q63ZY6 315 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 ATRAIDQ6UW56 229 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RNF144BQ7Z419 303 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RTN4RL2Q86UN3 420 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RHBDD1Q8TEB9 315 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 TMED6Q8WW62 240 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 NAT6Q93015 286 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 TMEM230Q96A57 120 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 C10orf35Q96D05 121 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 C2orf50Q96LR7 162 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 GUCD1Q96NT3 240 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 AQP10Q96PS8 301 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 SOX7Q9BT81 388 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 RNF126Q9BV68 326 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 CHST5Q9GZS9 411 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 WDR54Q9H977 334 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 ZNF701Q9NV72 531 aaPredicted RBP6.15□□□□□ -1.43
TDP1-213ENST00000555880 C1orf123Q9NWV4 160 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 DNAJB11Q9UBS4 358 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 DKKL1Q9UK85 242 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 PIGLQ9Y2B2 252 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 PCDHGA1Q9Y5H4 931 aa6.15□□□□□ -1.43
TDP1-213ENST00000555880 CHCHD2Q9Y6H1 151 aaPredicted RBP6.15□□□□□ -1.43
TDP1-213ENST00000555880 NCOA6Q14686 2063 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 GJE1A6NN92 205 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 ZNF705EA8MWA4 302 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 M0R135 149 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 DNASE2O00115 360 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 SDCBPO00560 298 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 KCNAB3O43448 404 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 SFTPBP07988 381 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 NAT2P11245 290 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 LYL1P12980 280 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 FAHP16930 419 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 IL32P24001 234 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 SUPT4H1P63272 117 aaKnown RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 SHBQ15464 509 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 EXT1Q16394 746 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 ANKRD55Q3KP44 614 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 MYO7BQ6PIF6 2116 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 HAGHLQ6PII5 290 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 DRAM2Q6UX65 266 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 IL34Q6ZMJ4 242 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 SLC16A14Q7RTX9 510 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 GALNTL5Q7Z4T8 443 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 LHFPL1Q86WI0 220 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 SGPP2Q8IWX5 399 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 LRRC18Q8N456 261 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 ZSCAN4Q8NAM6 433 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 SSC4DQ8WTU2 575 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 HAS2Q92819 552 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 TMEM54Q969K7 222 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 INTS12Q96CB8 462 aaKnown RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 RRNAD1Q96FB5 475 aaKnown RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 ZNF799Q96GE5 643 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 LIN37Q96GY3 246 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 RTBDNQ9BSG5 229 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 RBM24Q9BX46 236 aaKnown RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 PECRQ9BY49 303 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 MMP26Q9NRE1 261 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 TMEM100Q9NV29 134 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 PLEKHJ1Q9NW61 149 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 GSKIPQ9P0R6 139 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 LPAR3Q9UBY5 353 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 ZNF629Q9UEG4 869 aaPredicted RBP6.14□□□□□ -1.43
TDP1-213ENST00000555880 OSGIN2Q9Y236 505 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms