RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 RPS2P15880 293 aaKnown RBP11.83□□□□□ -0.52
SHMT2-222ENST00000555774 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 PHYHD1Q5SRE7 291 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 ATRAIDQ6UW56 229 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 MAML2Q8IZL2 1156 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-222ENST00000555774 SPSB1Q96BD6 273 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
SHMT2-222ENST00000555774 ZNF799Q96GE5 643 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 ZC3H10Q96K80 434 aaKnown RBP11.83□□□□□ -0.52
SHMT2-222ENST00000555774 SH2D2AQ9NP31 389 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 EDARQ9UNE0 448 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
SHMT2-222ENST00000555774 ABCD4O14678 606 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 TAAR5O14804 337 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 ADAP1O75689 374 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 ATG12O94817 140 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 COX6A1P12074 109 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 FCGR2AP12318 317 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 SSR4P51571 173 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 MRPS34P82930 218 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 IL15RAQ13261 267 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 RAET1LQ5VY80 246 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 C1QL2Q7Z5L3 287 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 CLRN3Q8NCR9 226 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 ZNF385AQ96PM9 386 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 SF3B5Q9BWJ5 86 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 METTL8Q9H825 291 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 DKKL1Q9UK85 242 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 PIGLQ9Y2B2 252 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 C5orf63A6NC05 138 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 OR5H15A6NDH6 313 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 CSTBP04080 98 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 KLK3P07288 261 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 FAHP16930 419 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 SERPINA2P20848 420 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 ZNF169Q14929 603 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 NKAPLQ5M9Q1 402 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 FAM27BQ5VT28 67 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 IL34Q6ZMJ4 242 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 C20orf196Q8IYI0 205 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 NARS2Q96I59 477 aaKnown RBP11.82□□□□□ -0.52
SHMT2-222ENST00000555774 IER2Q9BTL4 223 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 ULBP2Q9BZM5 246 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 C1orf123Q9NWV4 160 aa11.82□□□□□ -0.52
SHMT2-222ENST00000555774 CCL3P10147 92 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 RAC1P63000 192 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 TRA2AQ13595 282 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 RAB35Q15286 201 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 RSPO1Q2MKA7 263 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 EIF5AL1Q6IS14 154 aaKnown RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 SVBPQ8N300 66 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 OR5D18Q8NGL1 313 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 CCDC163A0A0D9SF12 145 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 C9J4A7 227 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 ZIC3O60481 467 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 HTR3BO95264 441 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 IFNA2P01563 188 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 CTSDP07339 412 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 UMODP07911 640 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 GLRA1P23415 457 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 HLA-BQ31612 363 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PABPC1L2AQ5JQF8 200 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PDSS1Q5T2R2 415 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 ZNF585AQ6P3V2 769 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PLXDC2Q6UX71 529 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 NPRL2Q8WTW4 380 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 SAT2Q96F10 170 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 Q96M66 194 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 RBM24Q9BX46 236 aaKnown RBP11.81□□□□□ -0.52
SHMT2-222ENST00000555774 SLC5A7Q9GZV3 580 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PROK2Q9HC23 129 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 DECR2Q9NUI1 292 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 SLC39A1Q9NY26 324 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 PLEK2Q9NYT0 353 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 OR5AC2Q9NZP5 309 aa11.81□□□□□ -0.52
SHMT2-222ENST00000555774 ATP6V1G2-DDX39BF2Z307 99 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 SDCBPO00560 298 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 CBR3O75828 277 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 PI3P19957 117 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 CRYGSP22914 178 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 CNN3Q15417 329 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 C10orf91Q5T1B1 145 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 SEMA6DQ8NFY4 1073 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 IFI44Q8TCB0 444 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 METTL9Q9H1A3 318 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 PURGQ9UJV8 347 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 CARHSP1Q9Y2V2 147 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 PTRH2Q9Y3E5 179 aaKnown RBP11.8□□□□□ -0.52
SHMT2-222ENST00000555774 RALGAPA1Q6GYQ0 2036 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 TSPAN9O75954 239 aa11.8□□□□□ -0.52
SHMT2-222ENST00000555774 SERPINA5P05154 406 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms