RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 hCG_38984A0A1B0GV85 526 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 A0A1B0GVI7 797 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 ZSCAN5BA6NJL1 495 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 ANKRD30BLA7E2S9 258 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 SPRY3O43610 288 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MTRF1O75570 445 aaKnown RBP9.29□□□□□ -0.92
SHMT2-218ENST00000555213 ARL6IP5O75915 188 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-218ENST00000555213 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 UBCP0CG48 685 aaKnown RBP9.29□□□□□ -0.92
SHMT2-218ENST00000555213 GNALP38405 381 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 GSK3AP49840 483 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MMP15P51511 669 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MZT1Q08AG7 82 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 HNRNPA0Q13151 305 aaKnown RBP9.29□□□□□ -0.92
SHMT2-218ENST00000555213 HSD17B12Q53GQ0 312 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 CLEC2AQ6UVW9 174 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 LINC00299Q6ZSB3 139 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 RNF144BQ7Z419 303 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 PARP16Q8N5Y8 322 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 OR2Z1Q8NG97 314 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 OR56B2PQ8NGI1 322 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 OR13G1Q8NGZ3 307 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MCFD2Q8NI22 146 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 TMEM106AQ96A25 262 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 FGGYQ96C11 551 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 ELMOD3Q96FG2 381 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MIXL1Q9H2W2 232 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 SAP30LQ9HAJ7 183 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MSL2Q9HCI7 577 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 ABCB9Q9NP78 766 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 TMEM100Q9NV29 134 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 NKIRAS2Q9NYR9 191 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 MRPL15Q9P015 296 aaKnown RBP9.29□□□□□ -0.92
SHMT2-218ENST00000555213 RHBDD3Q9Y3P4 386 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 V9GYS6 101 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
SHMT2-218ENST00000555213 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-218ENST00000555213 A6NIN4 97 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 IGHV1-46P01743 117 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 ADH4P08319 380 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 SLC2A2P11168 524 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF12P17014 697 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 PRSS12P56730 875 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 DSCR9P59020 149 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-218ENST00000555213 FAM3AP98173 230 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 TESK1Q15569 626 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 OR8B8Q15620 311 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 FAM166AQ6J272 317 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 PRSS57Q6UWY2 283 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 CCDC54Q8NEL0 328 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 ADAT1Q9BUB4 502 aaKnown RBP9.28□□□□□ -0.92
SHMT2-218ENST00000555213 PAPOLGQ9BWT3 736 aaKnown RBP9.28□□□□□ -0.92
SHMT2-218ENST00000555213 CXXC4Q9H2H0 198 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 PLEKHA1Q9HB21 404 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 FOXJ3Q9UPW0 622 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 DHDHQ9UQ10 334 aa9.28□□□□□ -0.92
SHMT2-218ENST00000555213 CREBBPQ92793 2442 aa9.27□□□□□ -0.92
SHMT2-218ENST00000555213 LOC390937A0A1W2PQ73 354 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 ANXA2P2A6NMY6 339 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SYT7O43581 403 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SSX4O60224 188 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 DHRS3O75911 302 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 CD55P08174 381 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 DAOP14920 347 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 ATF1P18846 271 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 TNFRSF1AP19438 455 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 FSTP19883 344 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 RAB3BP20337 219 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 ACKR3P25106 362 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 MAP2K3P46734 347 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SRP9P49458 86 aaKnown RBP9.27□□□□□ -0.93
SHMT2-218ENST00000555213 PDLIM4P50479 330 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 CCL8P80075 99 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 MRPS11P82912 194 aaKnown RBP9.27□□□□□ -0.93
SHMT2-218ENST00000555213 OR8G1Q15617 311 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 CARTPTQ16568 116 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 TMEM255AQ5JRV8 349 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 DOK3Q7L591 496 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 KRT74Q7RTS7 529 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 ZCCHC24Q8N2G6 241 aaKnown RBP9.27□□□□□ -0.93
SHMT2-218ENST00000555213 MFSD4AQ8N468 514 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SPERTQ8NA61 448 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 DNAAF1Q8NEP3 725 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SEMA6DQ8NFY4 1073 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 OR10AD1Q8NGE0 317 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 OR51A2Q8NGJ7 313 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 OR8S1Q8NH09 359 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 GTF3AQ92664 365 aaKnown RBP9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SLC25A28Q96A46 364 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 FAM71F1Q96KD3 344 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-218ENST00000555213 SOSTQ9BQB4 213 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 TAS2R4Q9NYW5 299 aa9.27□□□□□ -0.93
SHMT2-218ENST00000555213 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
SHMT2-218ENST00000555213 A0A0B4J203 849 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms