RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ZNF529Q6P280 563 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 ZNF813Q6ZN06 617 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 FAM214BQ7L5A3 538 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 SLC22A24Q8N4F4 322 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 JAGN1Q8N5M9 183 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 NOXO1Q8NFA2 376 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 OR51S1Q8NGJ8 323 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 CENPMQ9NSP4 180 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 LEUTXA8MZ59 168 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 RAB3DO95716 219 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 CYB5AP00167 134 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 CD3DP04234 171 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 RLN1P04808 185 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 BMP5P22003 454 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 P2RX3P56373 397 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 GMFBP60983 142 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 LINC00346Q8IVM7 164 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 OR8H3Q8N146 312 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 ZIC4Q8N9L1 334 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 RELL2Q8NC24 303 aaPredicted RBP15.14■□□□□ 0.01
SHOX-204ENST00000554971 OR2AJ1Q8NGZ0 328 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 STARD4Q96DR4 205 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 DPCDQ9BVM2 203 aaPredicted RBP15.14■□□□□ 0.01
SHOX-204ENST00000554971 PBOV1Q9GZY1 135 aa15.14■□□□□ 0.01
SHOX-204ENST00000554971 ASH1LQ9NR48 2969 aaKnown RBP15.14■□□□□ 0.01
SHOX-204ENST00000554971 IGKV1D-43A0A0B4J1Z2 117 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 ZNF878C9JN71 531 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 H3BSH0 61 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 SYT7O43581 403 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 TTRP02766 147 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 PGA4P0DJD7 388 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 PGA3P0DJD8 388 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 CTSSP25774 331 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 OTPQ5XKR4 325 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 SLC25A47Q6Q0C1 308 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 ZNF627Q7L945 461 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 NUFIP2Q7Z417 695 aaKnown RBP15.13■□□□□ 0.01
SHOX-204ENST00000554971 WDFY1Q8IWB7 410 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 OR2AK2Q8NG84 335 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 OR9K2Q8NGE7 335 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 ZNF385AQ96PM9 386 aaKnown RBP15.13■□□□□ 0.01
SHOX-204ENST00000554971 CITED4Q96RK1 184 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 NAA11Q9BSU3 229 aaPredicted RBP15.13■□□□□ 0.01
SHOX-204ENST00000554971 ZNF629Q9UEG4 869 aaPredicted RBP15.13■□□□□ 0.01
SHOX-204ENST00000554971 GDF2Q9UK05 429 aaPredicted RBP15.13■□□□□ 0.01
SHOX-204ENST00000554971 RHBDD3Q9Y3P4 386 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 FLVCR1Q9Y5Y0 555 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 H3BUI4 141 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 P2RY10O00398 339 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 AGFG2O95081 481 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 CGAP01215 116 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 GUCA2AQ02747 115 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 SPOCK1Q08629 439 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 OPCMLQ14982 345 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 HIST3H3Q16695 136 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 CLVS2Q5SYC1 327 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 MRGPRGQ86SM5 289 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 CNEP1R1Q8N9A8 125 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 OR1M1Q8NGA1 313 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 AQP3Q92482 292 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 FAM46BQ96A09 425 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 GP6Q9HCN6 339 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 CA10Q9NS85 328 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 SLC2A8Q9NY64 477 aa15.13■□□□□ 0.01
SHOX-204ENST00000554971 ZNF724A8MTY0 619 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 ZNF736B4DX44 427 aaPredicted RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 MCRIP1C9JLW8 97 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 L7N2F9 121 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 TRAF3IP2O43734 574 aaPredicted RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 MPC2O95563 127 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 CRHP06850 196 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 TBPP20226 339 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 RAB3AP20336 220 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 CHRNB4P30926 498 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 EXOSC2Q13868 293 aaKnown RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 POU4F3Q15319 338 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 PGAP1Q75T13 922 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 OR51A2Q8NGJ7 313 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 FGGYQ96C11 551 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 SF3B5Q9BWJ5 86 aaKnown RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 SFXN3Q9BWM7 321 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 GSX2Q9BZM3 304 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 CHIAQ9BZP6 476 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 GLRX2Q9NS18 164 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 CGGBP1Q9UFW8 167 aaPredicted RBP15.12■□□□□ 0.01
SHOX-204ENST00000554971 OPN4Q9UHM6 478 aa15.12■□□□□ 0.01
SHOX-204ENST00000554971 DISC1C4P0D8 188 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 F5H5P2 479 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 VAMP5O95183 116 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 CHRM2P08172 466 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 OR2W3Q7Z3T1 314 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 OR4D10Q8NGI6 311 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 PRRT1Q99946 306 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 KIF25Q9UIL4 384 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 ABCA4P78363 2273 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 ZNF726A6NNF4 738 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 IL18BPO95998 194 aa15.11■□□□□ 0.01
SHOX-204ENST00000554971 ZNF43P17038 809 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms