RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TRAF3IP2	O43734	574 aa	Predicted RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TPST1	O60507	370 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TPST2	O60704	377 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CLN5	O75503	358 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	SCGB2A1	O75556	95 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	HLA-H	P01893	362 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	BCHE	P06276	602 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	DBI	P07108	87 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ADRA2A	P08913	450 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	PNMT	P11086	282 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CBR1	P16152	277 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CXCR1	P25024	350 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	FKBP2	P26885	142 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	DUT	P33316	252 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	OPRL1	P41146	370 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	RPS5	P46782	204 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	PPOX	P50336	477 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	SNRPD2	P62316	118 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	SCGB2A2	Q13296	93 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CEACAM16	Q2WEN9	425 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	MS4A18	Q3C1V0	323 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	GLIPR1L2	Q4G1C9	344 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TNFAIP8L3	Q5GJ75	292 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ARMCX4	Q5H9R4	360 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TMEM225	Q6GV28	225 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CD164L2	Q6UWJ8	174 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	HOGA1	Q86XE5	327 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	STH	Q8IWL8	128 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	MSRB3	Q8IXL7	192 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF786	Q8N393	782 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	RIBC1	Q8N443	379 aa	Predicted RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	KLHDC1	Q8N7A1	406 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR9I1	Q8NGQ6	314 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNRF4	Q8WWF5	429 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	YIPF5	Q969M3	257 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC25A36	Q96CQ1	311 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZIM3	Q96PE6	472 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TXN2	Q99757	166 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	CABLES2	Q9BTV7	478 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	EMC6	Q9BV81	110 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	TMEM109	Q9BVC6	243 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	MRPL37	Q9BZE1	423 aa	Known RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	PLA2G12A	Q9BZM1	189 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	LINC00470	Q9BZP3	86 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	RACGAP1	Q9H0H5	632 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	LPAR2	Q9HBW0	351 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	B3GNT2	Q9NY97	397 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	PRDM4	Q9UKN5	801 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	FKBP7	Q9Y680	259 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ARFGEF3	Q5TH69	2177 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	ANK2	Q01484	3957 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	YLPM1	P49750	1951 aa	Known RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	IGLV7-46	A0A075B6I9	117 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956		F8WDY8	70 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	RFXANK	O14593	260 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	BIRC5	O15392	142 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	PDE5A	O76074	875 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF35	P13682	527 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	NPR2	P20594	1047 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	GRPR	P30550	384 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	CRAT	P43155	626 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ALDH3B1	P43353	468 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	PITPNB	P48739	271 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	UBE2N	P61088	152 aa	Known RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	HPCA	P84074	193 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	IFFO1	Q0D2I5	559 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	STX3	Q13277	289 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	KRT71	Q3SY84	523 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	TMEM255A	Q5JRV8	349 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	CARD17	Q5XLA6	110 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956		Q6ZRP5	223 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	COX8C	Q7Z4L0	72 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF440	Q8IYI8	595 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	LRRC34	Q8IZ02	419 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	SMYD1	Q8NB12	490 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	NUP37	Q8NFH4	326 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR4F15	Q8NGB8	312 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	CLDND2	Q8NHS1	167 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	MFSD8	Q8NHS3	518 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	GTF3A	Q92664	365 aa	Known RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	TSPAN32	Q96QS1	320 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR2M2	Q96R28	347 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR52B2	Q96RD2	323 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	SPAG8	Q99932	426 aa	Predicted RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	RIBC2	Q9H4K1	309 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	C5orf66	Q9H5L9	145 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	NARFL	Q9H6Q4	476 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF442	Q9H7R0	627 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	TPT1P8	Q9HAU6	139 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	CRLF2	Q9HC73	371 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	DCAF16	Q9NXF7	216 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC25A37	Q9NYZ2	338 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	TREM2	Q9NZC2	230 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	FZR1	Q9UM11	496 aa		4.17	□□□□□ -1.74
PSMC6-208	ENST00000554956	RASD1	Q9Y272	281 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms