RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 Q6ZR03 302 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 RFPL4BQ6ZWI9 263 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PIGWQ7Z7B1 504 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 C1orf87Q8N0U7 546 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CCDC197Q8NCU1 140 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 NPEPL1Q8NDH3 523 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 WFDC9Q8NEX5 89 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR4F17Q8NGA8 305 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR13G1Q8NGZ3 307 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR5R1Q8NH85 324 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 AKR7LQ8NHP1 331 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 NPRL2Q8WTW4 380 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 LHX4Q969G2 390 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PHF21AQ96BD5 680 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 HAVCR1Q96D42 359 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CMBLQ96DG6 245 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 TMEM19Q96HH6 336 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR4F4Q96R69 305 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR52E6Q96RD3 313 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 MYCBPQ99417 103 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 TMEM43Q9BTV4 400 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 MRPL13Q9BYD1 178 aaKnown RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 TAS2R5Q9NYW4 299 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ERVK-18Q9QC07 812 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 LGALS13Q9UHV8 139 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 VPREB3Q9UKI3 123 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ARHGAP32A7KAX9 2087 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 A0A0B4J2E0 115 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 A0A1B0GX12 115 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 C5orf58C9J3I9 102 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 RFXANKO14593 260 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 SHBGP04278 402 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 CST2P09228 141 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 FBP1P09467 338 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 IRF2P14316 349 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 ETS2P15036 469 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 LBPP18428 481 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 GUCA1AP43080 201 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-228ENST00000554592 EFNB2P52799 333 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 BRWD1-AS2P59051 145 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 PCBD1P61457 104 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 ARF6P62330 175 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 KCNJ8Q15842 424 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 SNCBQ16143 134 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 SGCAQ16586 387 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF74Q16587 644 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 C10orf128Q5T292 105 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 LYPD2Q6UXB3 125 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 HDDC2Q7Z4H3 204 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 CCDC190Q86UF4 302 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 C4orf33Q8N1A6 199 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 BBS10Q8TAM1 723 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF420Q8TAQ5 688 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-228ENST00000554592 DYDC1Q8WWB3 177 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 HIST1H2ACQ93077 130 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 TEX37Q96LM6 180 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 SEPHS2Q99611 448 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 OR2H1Q9GZK4 316 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 WNT5BQ9H1J7 359 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 TPT1P8Q9HAU6 139 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 NANSQ9NR45 359 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 BATF3Q9NR55 127 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 INTS9Q9NV88 658 aaKnown RBP3.95□□□□□ -1.78
ATXN3-228ENST00000554592 NKIRAS1Q9NYS0 192 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 STX18Q9P2W9 335 aaKnown RBP3.95□□□□□ -1.78
ATXN3-228ENST00000554592 FOXJ3Q9UPW0 622 aa3.95□□□□□ -1.78
ATXN3-228ENST00000554592 hCG_1809904A0A1W2PP81 198 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 A0A1W2PPE2 198 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 A0A1W2PR64 198 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 A0A1W2PRG6 482 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 TMEM120BA0PK00 339 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 UBE2CO00762 179 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 NDUFA2O43678 99 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 FMO6PO60774 539 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 TRMUO75648 421 aaKnown RBP3.94□□□□□ -1.78
ATXN3-228ENST00000554592 GAGE7O76087 117 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 ANP32DO95626 131 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-228ENST00000554592 IL6P05231 212 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 ZCCHC18P0CG32 403 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 GAGE12FP0CL80 117 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 GAGE12GP0CL81 117 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 GAGE12IP0CL82 117 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 COX5BP10606 129 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 NR2C1P13056 603 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 ACADSP16219 412 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 EEF1B2P24534 225 aaKnown RBP3.94□□□□□ -1.78
ATXN3-228ENST00000554592 LAP3P28838 519 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 PMELP40967 661 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 DAP3P51398 398 aaKnown RBP3.94□□□□□ -1.78
ATXN3-228ENST00000554592 NME5P56597 212 aa3.94□□□□□ -1.78
ATXN3-228ENST00000554592 RGS8P57771 180 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-228ENST00000554592 NCALDP61601 193 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms