RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 IL13RA1P78552 427 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 PHYHD1Q5SRE7 291 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR10S1Q8NGN2 331 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 RBM24Q9BX46 236 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 MYOZ1Q9NP98 299 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 NDRG3Q9UGV2 375 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 P2RY10O00398 339 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SPTBN2O15020 2390 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 CXCL13O43927 109 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 GUCA1AP43080 201 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 NPBWR1P48145 328 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 FOXO1Q12778 655 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR1C1Q15619 314 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLC25A47Q6Q0C1 308 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 PIP4P1Q86T03 277 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 LRRC18Q8N456 261 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 THAP6Q8TBB0 222 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 RRNAD1Q96FB5 475 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SCPEP1Q9HB40 452 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 KCNK7Q9Y2U2 307 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 NCKAP5O14513 1909 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 GJE1A6NN92 205 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 F8W036 122 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 CELA3AP09093 270 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 CSNK1A1P48729 337 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 RNASE10Q5GAN6 216 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZFP82Q8N141 532 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 SVBPQ8N300 66 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 CSAG2Q9Y5P2 127 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 DSPP15924 2871 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 LOC107986453A0A1B0GWG9 222 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 NFYBP25208 207 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 HRH1P35367 487 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 RAC3P60763 192 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 B2MP61769 119 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 SRYQ05066 204 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF239Q16600 458 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 HIST3H3Q16695 136 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 GGNQ86UU5 652 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 PAQR4Q8N4S7 273 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 MITD1Q8WV92 249 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF837Q96EG3 531 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 CMSS1Q9BQ75 279 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 FAM96BQ9Y3D0 163 aa12.87□□□□□ -0.35
PPP4R3A-201ENST00000554308 KMT2EQ8IZD2 1858 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 FAM166BA8MTA8 275 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 VAMP5O95183 116 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CD2P06729 351 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 HSD11B1P28845 292 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 HOXA1P49639 335 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 AIMP2Q13155 320 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 UQCC3Q6UW78 93 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF813Q6ZN06 617 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 RNF144BQ7Z419 303 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 SULF2Q8IWU5 870 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CCDC36Q8IYA8 594 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR10D3Q8NH80 312 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 AQP3Q92482 292 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 CPNE2Q96FN4 548 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 HHLA2Q9UM44 414 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 RAB27BO00194 218 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 FGF16O43320 207 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 IL2RAP01589 272 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 GNB3P16520 340 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 NTF4P34130 210 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 SERPINF1P36955 418 aa12.86□□□□□ -0.35
PPP4R3A-201ENST00000554308 KCNJ3P48549 501 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms