RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LHFPL3Q86UP9 236 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 NKAIN4Q8IVV8 208 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 LAX1Q8IWV1 398 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 NRMQ8IXM6 262 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 C1orf174Q8IYL3 243 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 Q8N402 240 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 LNX2Q8N448 690 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 CELF2-AS1Q8N7Q2 184 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MOSPD2Q8NHP6 518 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 TMEM239Q8WW34 195 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 TMEM203Q969S6 136 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 ST6GAL2Q96JF0 529 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 RHOVQ96L33 236 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 CMTM3Q96MX0 182 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 RBP7Q96R05 134 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 DIRC2Q96SL1 478 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ATF6BQ99941 703 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZNF426Q9BUY5 554 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZNF747Q9BV97 191 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 C1QTNF5Q9BXJ0 243 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 GON7Q9BXV9 100 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MRPL13Q9BYD1 178 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 OR2H1Q9GZK4 316 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MS4A7Q9GZW8 240 aaPredicted RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 NIPAL2Q9H841 368 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZMAT3Q9HA38 289 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 ELOVL3Q9HB03 270 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 RPRD1BQ9NQG5 326 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 C20orf141Q9NUB4 165 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 OR5V1Q9UGF6 321 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 OPN4Q9UHM6 478 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 NUP50Q9UKX7 468 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MED31Q9Y3C7 131 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 WNK2Q9Y3S1 2297 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 LOC100509620A0A075B734 347 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 IGKV1D-43A0A0B4J1Z2 117 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 FAM240BA0A1B0GVZ2 78 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ANKRD61A6NGH8 418 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PRR23D1E9PI22 279 aaPredicted RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 GABRPO00591 440 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PLA2G10O15496 165 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PTP4A3O75365 173 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 IGHMP01871 453 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 CLEC2LP0C7M8 214 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PRR23D2P0DMB1 279 aaPredicted RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 TNFRSF1AP19438 455 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 CELP19835 753 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 CD33P20138 364 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PRTN3P24158 256 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ZFP36P26651 326 aaKnown RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 LAP3P28838 519 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ACTC1P68032 377 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ACTA1P68133 377 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 MRPS15P82914 257 aaKnown RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 ZNF154Q13106 437 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 GALEQ14376 348 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 CDK10Q15131 360 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 HSD17B12Q53GQ0 312 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ESCO2Q56NI9 601 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ALG10Q5BKT4 473 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ATAD3CQ5T2N8 411 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 OR2G6Q5TZ20 316 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ZNF774Q6NX45 483 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 BAIAP2L2Q6UXY1 529 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 NOXA1Q86UR1 476 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 LRRC28Q86X40 367 aaPredicted RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 CPOQ8IVL8 374 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 TCTE3Q8IZS6 198 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ASCC1Q8N9N2 400 aaKnown RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 DEFB108BQ8NET1 73 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 OR2Z1Q8NG97 314 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 OR8D4Q8NGM9 314 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 OR4Q3Q8NH05 313 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 SPRYD4Q8WW59 207 aaPredicted RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 SLC7A6Q92536 515 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 SLC25A28Q96A46 364 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 NABP1Q96AH0 204 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 C4orf45Q96LM5 186 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 SAMD8Q96LT4 415 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PRSS27Q9BQR3 290 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 NDEL1Q9GZM8 345 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 C11orf54Q9H0W9 315 aaPredicted RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 TXNIPQ9H3M7 391 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 UNKLQ9H9P5 680 aaKnown RBP7.45□□□□□ -1.22
TDP1-208ENST00000553989 TRIM36Q9NQ86 728 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 MMP26Q9NRE1 261 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 TMEM106BQ9NUM4 274 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 DCAF16Q9NXF7 216 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ING3Q9NXR8 418 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 COMMD3Q9UBI1 195 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 ZNF69Q9UC07 566 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 TIMM10BQ9Y5J6 103 aa7.45□□□□□ -1.22
TDP1-208ENST00000553989 PPIAL4EA0A075B759 164 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 IGHV3OR16-10A0A075B7F0 116 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 TRAV1-2A0A0B4J238 106 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 PPIAL4CA0A0B4J2A2 164 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 RIIAD1A6NNX1 92 aa7.44□□□□□ -1.22
TDP1-208ENST00000553989 C12orf71A8MTZ7 269 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms