RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TXNIPQ9H3M7 391 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 NANOGQ9H9S0 305 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ELL3Q9HB65 397 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CCNB1IP1Q9NPC3 277 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 INIPQ9NRY2 104 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CYSLTR2Q9NS75 346 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 MRPL22Q9NWU5 206 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CALML5Q9NZT1 146 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF319Q9P2F9 582 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RHCGQ9UBD6 479 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RPS6KB2Q9UBS0 482 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 MIOXQ9UGB7 285 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 IL20RAQ9UHF4 553 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FBXL3Q9UKT7 428 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TIMM10BQ9Y5J6 103 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 LHFPL6Q9Y693 200 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 POMT1Q9Y6A1 747 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 V9GYY5 206 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 A0A087WUU8 490 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 IGLV1-36A0A0B4J1U3 117 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TRAPPC13A5PLN9 417 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 NKX6-3A6NJ46 265 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SH2D7A6NKC9 451 aaPredicted RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CENPBD1B2RD01 187 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 H3BSA7 217 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 H3BUX3 64 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 LGALS8O00214 317 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 DVL1O14640 695 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 PHYHO14832 338 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 UBDO15205 165 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ADAM20O43506 726 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SGCEO43556 437 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 PTP4A3O75365 173 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 FARS2O95363 451 aaKnown RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 FSTL3O95633 263 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 PTHP01270 115 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 IGLV2-11P01706 119 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CRYBA1P05813 215 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ACSM4P0C7M7 580 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 COX5BP10606 129 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 UMPSP11172 480 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 MSR1P21757 451 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CA6P23280 308 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TNFSF8P32971 234 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SAA4P35542 130 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 KIR2DS4P43632 304 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TGM4P49221 684 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 BMXP51813 675 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 BLCAPP62952 87 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF92Q03936 586 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SLC3A1Q07837 685 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CD47Q08722 323 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 PCK2Q16822 640 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 DGUOKQ16854 277 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 C2orf68Q2NKX9 166 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 KRT71Q3SY84 523 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 DMRTC1Q5HYR2 192 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 WDR38Q5JTN6 314 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 GPR157Q5UAW9 335 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TEX36Q5VZQ5 186 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 FAM205BPQ63HN1 556 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 BTNL3Q6UXE8 466 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 MSANTD1Q6ZTZ1 278 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CCDC80Q76M96 950 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF367Q7RTV3 350 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 NANOGNBQ7Z5D8 188 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ARMC8Q8IUR7 673 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 LINC00346Q8IVM7 164 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 MREGQ8N565 214 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 EIF1ADQ8N9N8 165 aaKnown RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 OR5T2Q8NGG2 359 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 OR10A6Q8NH74 314 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 OR1F12Q8NHA8 337 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM239Q8WW34 195 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SSMEM1Q8WWF3 244 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SLCO4A1Q96BD0 722 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SPDL1Q96EA4 605 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SGTBQ96EQ0 304 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TECTBQ96PL2 329 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 EPYCQ99645 322 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CGREF1Q99674 301 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ROPN1BQ9BZX4 212 aaPredicted RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 EGLN1Q9GZT9 426 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 WDR13Q9H1Z4 485 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 C1orf198Q9H425 327 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 FN3KQ9H479 309 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 KAT8Q9H7Z6 458 aaKnown RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 ROPN1Q9HAT0 212 aaPredicted RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 INPP5EQ9NRR6 644 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 SNTG1Q9NSN8 517 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 NECAP2Q9NVZ3 263 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CCDC167Q9P0B6 97 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 EIF3KQ9UBQ5 218 aaKnown RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CLN8Q9UBY8 286 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 RIMS3Q9UJD0 308 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 RPUSD1Q9UJJ7 312 aaKnown RBP2.51□□□□□ -2.01
SLIRP-202ENST00000553981 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms