RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PPP1CBP62140 327 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 SORDQ00796 357 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 NAAAQ02083 359 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 GK2Q14410 553 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-208ENST00000553868 DDI2Q5TDH0 399 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 RFPL4BQ6ZWI9 263 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CDH26Q8IXH8 852 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 PAQR4Q8N4S7 273 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-208ENST00000553868 ORAI1Q96D31 301 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CHST5Q9GZS9 411 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 PLGRKTQ9HBL7 147 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 NDRG3Q9UGV2 375 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 DAPK2Q9UIK4 370 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 PMF1-BGLAPU3KQ54 211 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 ROS1P08922 2347 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 A0A0G2JK05 382 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 RGS5O15539 181 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 NGFP01138 241 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ALDOBP05062 364 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 FAHP16930 419 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ADRA2CP18825 462 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 PRKACBP22694 351 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ANOS1P23352 680 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 PTAFRP25105 342 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 CFPP27918 469 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 SCAND1P57086 179 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 CNN3Q15417 329 aaKnown RBP12.39□□□□□ -0.43
SHMT2-208ENST00000553868 CLVS2Q5SYC1 327 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 MYPOPQ86VE0 399 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ZNF101Q8IZC7 436 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 OR6Q1Q8NGQ2 317 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 OR13C9Q8NGT0 318 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 ZNF671Q8TAW3 534 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 TBC1D15Q8TC07 691 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 SPSB1Q96BD6 273 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 CMAHPQ9Y471 501 aa12.39□□□□□ -0.43
SHMT2-208ENST00000553868 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 ANKRD30BLA7E2S9 258 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 CD5LO43866 347 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 HCKP08631 526 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 FAM157BP0CG42 384 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 CALCBP10092 127 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 RAC2P15153 192 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 ATF1P18846 271 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 BMXP51813 675 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
SHMT2-208ENST00000553868 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 RAB11BQ15907 218 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 MOGQ16653 247 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 ASPHD2Q6ICH7 369 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 WFDC8Q8IUA0 241 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 OR51B6Q9H340 312 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 SLC7A11Q9UPY5 501 aa12.38□□□□□ -0.43
SHMT2-208ENST00000553868 RAI1Q7Z5J4 1906 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-208ENST00000553868 A6NIN4 97 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 CD300LBA8K4G0 201 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 SLC17A2O00624 439 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 CST4P01036 141 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 NRASP01111 189 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 ACKR3P25106 362 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 GCH1P30793 250 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 ZNF718Q3SXZ3 478 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 TMEM42Q69YG0 159 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 JAGN1Q8N5M9 183 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
SHMT2-208ENST00000553868 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 GFI1Q99684 422 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 METTL17Q9H7H0 456 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-208ENST00000553868 HMG20AQ9NP66 347 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 NPAP1Q9NZP6 1156 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 COMMD3Q9UBI1 195 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 ETV7Q9Y603 341 aa12.37□□□□□ -0.43
SHMT2-208ENST00000553868 A8MV72 311 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-208ENST00000553868 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 GMDSO60547 372 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 CD37P11049 281 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-208ENST00000553868 CD40P25942 277 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 ZNF93P35789 620 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-208ENST00000553868 HLXQ14774 488 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-208ENST00000553868 SPANXN2Q5MJ10 180 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 C1orf100Q5SVJ3 147 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 HES5Q5TA89 166 aa12.36□□□□□ -0.43
SHMT2-208ENST00000553868 KRT74Q7RTS7 529 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms