RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MSX1P28360 303 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 BLVRBP30043 206 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 PTGFRP43088 359 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ID4P47928 161 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CCL7P80098 99 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 SPEM2Q0P670 501 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 AIMP2Q13155 320 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 IL15RAQ13261 267 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 SNAI3Q3KNW1 292 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CDCP2Q5VXM1 449 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 RPL7L1Q6DKI1 246 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR2A2Q6IF42 318 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 Q7L0L9 218 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CCDC36Q8IYA8 594 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR5L2Q8NGL0 311 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CCDC74BQ96LY2 380 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 AQP10Q96PS8 301 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CDC6Q99741 560 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 LIME1Q9H400 295 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 METTL8Q9H825 291 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF701Q9NV72 531 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF726A6NNF4 738 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF705EA8MWA4 302 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 F8W036 122 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 SIGLEC6O43699 453 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CSTBP04080 98 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 FCGR2AP12318 317 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 MUC1P15941 1255 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 PNLIPP16233 465 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 IL32P24001 234 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 GABRR1P24046 479 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 LPAR6P43657 344 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR3A2P47893 321 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 GRB2P62993 217 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 NAAAQ02083 359 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 HGFACQ04756 655 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 C10orf91Q5T1B1 145 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 GALNTL5Q7Z4T8 443 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR2AE1Q8NHA4 323 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ADAMTS17Q8TE56 1095 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 DNASE2BQ8WZ79 361 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 DYRK2Q92630 601 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ARL11Q969Q4 196 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 CPNE2Q96FN4 548 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 SHDQ96IW2 340 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 URM1Q9BTM9 101 aaKnown RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 PHF7Q9BWX1 381 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 SAV1Q9H4B6 383 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF160Q9HCG1 818 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 GSKIPQ9P0R6 139 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 LPAR3Q9UBY5 353 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF629Q9UEG4 869 aaPredicted RBP6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 PRELID3BQ9Y3B1 194 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 V9GYS6 101 aa6.07□□□□□ -1.44
LINC-ROR-201ENST00000553704 FIGNL2A6NMB9 653 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ANGPTL7O43827 346 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 LRP3O75074 770 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 DHRS3O75911 302 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 SFTPBP07988 381 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 H2AFB1P0C5Y9 115 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF708P17019 499 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 MSR1P21757 451 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 NME2P22392 152 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ACKR3P25106 362 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 NFYBP25208 207 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 CSNK1A1P48729 337 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 NUBP1P53384 320 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ECH1Q13011 328 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 RBM39Q14498 530 aaKnown RBP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 PCOLCEQ15113 449 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 STK11Q15831 433 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF239Q16600 458 aaKnown RBP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 H3F3CQ6NXT2 135 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 SVBPQ8N300 66 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 SLC22A8Q8TCC7 542 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 RHBDD1Q8TEB9 315 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 RNF141Q8WVD5 230 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 C2orf50Q96LR7 162 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 DEFB126Q9BYW3 111 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 CHST5Q9GZS9 411 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 HRH4Q9H3N8 390 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 ELL3Q9HB65 397 aaPredicted RBP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 TREM1Q9NP99 234 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 MMP26Q9NRE1 261 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 GPR173Q9NS66 373 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 OCIAD1Q9NX40 245 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 RARRES3Q9UL19 164 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 PIGLQ9Y2B2 252 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 CARHSP1Q9Y2V2 147 aaKnown RBP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 SDK2Q58EX2 2172 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 C9JQL5 133 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 FARS2O95363 451 aaKnown RBP6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 HKR1P10072 659 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 CCL3P10147 92 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 THBS4P35443 961 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 H3F3AP84243 136 aa6.06□□□□□ -1.44
LINC-ROR-201ENST00000553704 CYCSP99999 105 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms