RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ADAP1O75689 374 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RP2O75695 350 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 GATBO75879 557 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 CCNKO75909 580 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 NDUFB10O96000 172 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 IFNA16P05015 189 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ADRA2AP08913 450 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 LINC00614P0C842 121 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MCF2P10911 925 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 SLC2A5P22732 501 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ME2P23368 584 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 DTYMKP23919 212 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 AK4P27144 223 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 PSMB5P28074 263 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MPIP34949 423 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 GPX4P36969 197 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 TALDO1P37837 337 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CEACAM3P40198 252 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 SLC1A2P43004 574 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 OMPP47874 163 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RPL14P50914 215 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 CEBPGP53567 150 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 OR2B6P58173 313 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 GNG2P59768 71 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 PSME3P61289 254 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ATP6V0D1P61421 351 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 VSNL1P62760 191 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CACNG7P62955 275 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TNNC1P63316 161 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ADARB1P78563 741 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 HPCAP84074 193 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 IFITM2Q01629 132 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 OGDHQ02218 1023 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RAD51Q06609 339 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF816Q0VGE8 651 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 TCP10Q12799 353 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ITIH4Q14624 930 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 IRF4Q15306 451 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 UAP1Q16222 522 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 SSX2Q16385 188 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 IMPG1Q17R60 797 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TMEM249Q2WGJ8 235 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 NDUFAF6Q330K2 333 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 XKR7Q5GH72 579 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF684Q5T5D7 378 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 KCTD16Q68DU8 428 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 EIF3MQ7L2H7 374 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 DPPA2Q7Z7J5 298 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CYP4Z2PQ8N1L4 340 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 UBE2J2Q8N2K1 259 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 PQLC3Q8N755 202 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TMEM35BQ8NCS4 154 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 PROKR2Q8NFJ6 384 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RHEBL1Q8TAI7 183 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ABHD3Q8WU67 409 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 DNAJB3Q8WWF6 145 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RASSF5Q8WWW0 418 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CREB3L1Q96BA8 519 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 SGTBQ96EQ0 304 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MRPL48Q96GC5 212 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 OR8B4Q96RC9 309 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TEAD3Q99594 435 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 DOK1Q99704 481 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TMEM43Q9BTV4 400 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TMED9Q9BVK6 235 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF717Q9BY31 904 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 SLC19A3Q9BZV2 496 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ROPN1BQ9BZX4 212 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZYG11BQ9C0D3 744 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 SLC38A1Q9H2H9 487 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 WDR55Q9H6Y2 383 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 UBE2ZQ9H832 354 aaPredicted RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 WDR54Q9H977 334 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MCCC2Q9HCC0 563 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF160Q9HCG1 818 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 LYRM4Q9HD34 91 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 VCX3AQ9NNX9 186 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RAB18Q9NP72 206 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 XPNPEP1Q9NQW7 623 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 GID8Q9NWU2 228 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MYEF2Q9P2K5 600 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 NUP50Q9UKX7 468 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 NDRG2Q9UN36 371 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 NDUFAF1Q9Y375 327 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MMACHCQ9Y4U1 282 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 S4R3C0 116 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 V9GYQ6 96 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 BCL9LQ86UU0 1499 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CUX1P39880 1505 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TOPBP1Q92547 1522 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 WDR90Q96KV7 1748 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 MAST4O15021 2626 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 RTEL1-TNFRSF6BF6WH68 1400 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ZFYVE9O95405 1425 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SCAPERQ9BY12 1400 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 A0A1B0GV90 55 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 A0A1W2PQL4 384 aaPredicted RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 TMEM213A2RRL7 107 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ZNF99A8MXY4 864 aaPredicted RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 RNASEK-C17orf49H0YIS7 233 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms