RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GPM6AP51674 278 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 BDH1Q02338 343 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 LOXL1Q08397 574 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-202ENST00000553656 ZNF154Q13106 437 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 IRF3Q14653 427 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 DMKNQ6E0U4 476 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-202ENST00000553656 SVOPQ8N4V2 548 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 OR51A4Q8NGJ6 313 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 Q8TCH9 128 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 RPS4Y2Q8TD47 263 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 GHSRQ92847 366 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 COX4I2Q96KJ9 171 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 NARFLQ9H6Q4 476 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 RNF7Q9UBF6 113 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 WIPI2Q9Y4P8 454 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 NPTNQ9Y639 398 aa11.68□□□□□ -0.54
TUBB3-202ENST00000553656 CHD3Q12873 2000 aaKnown RBP11.68□□□□□ -0.54
TUBB3-202ENST00000553656 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 LRP5LA4QPB2 252 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 CYB5R3P00387 301 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 FOSL1P15407 271 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 SOX2P48431 317 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 BTG1P62324 171 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 YIF1BQ5BJH7 314 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 ZNF573Q86YE8 665 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 SERPINA12Q8IW75 414 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 CIARTQ8N365 385 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 NPRL2Q8WTW4 380 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 UFD1Q92890 307 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 TMUB1Q9BVT8 246 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
TUBB3-202ENST00000553656 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-202ENST00000553656 DYSFO75923 2080 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 OTOGQ6ZRI0 2925 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 FAM230AA0A1W2PPH8 454 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 PLPP2O43688 288 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 INHBBP09529 407 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 PRKACBP22694 351 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 PMELP40967 661 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 DMRTC1Q5HYR2 192 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 ZNF826PQ6ZT77 177 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 UTS2BQ765I0 119 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 ZNF367Q7RTV3 350 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 MUC20Q8N307 709 aaPredicted RBP11.66□□□□□ -0.54
TUBB3-202ENST00000553656 SPICQ8N5J4 248 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 MAPK1IP1LQ8NDC0 245 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 LRRC29Q8WV35 223 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 THRSPQ92748 146 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 RPL3LQ92901 407 aaKnown RBP11.66□□□□□ -0.54
TUBB3-202ENST00000553656 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 BORCS8Q96FH0 119 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 TLNRD1Q9H1K6 362 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 PCDHB10Q9UN67 800 aa11.66□□□□□ -0.54
TUBB3-202ENST00000553656 LSM2Q9Y333 95 aaKnown RBP11.66□□□□□ -0.54
TUBB3-202ENST00000553656 PPIAL4EA0A075B759 164 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PPIAL4DF5H284 164 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 CDIPTO14735 213 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 CD1AP06126 327 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PPIAL4FP0DN26 164 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 ATF1P18846 271 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
TUBB3-202ENST00000553656 MAP2K4P45985 399 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 FUT6P51993 359 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PPP3R1P63098 170 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 HNRNPA0Q13151 305 aaKnown RBP11.65□□□□□ -0.54
TUBB3-202ENST00000553656 UBE2V2Q15819 145 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 KCNJ8Q15842 424 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 FAM76BQ5HYJ3 339 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 HAGHLQ6PII5 290 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PARP16Q8N5Y8 322 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 SCCPDHQ8NBX0 429 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 ZNF671Q8TAW3 534 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 RGP1Q92546 391 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-202ENST00000553656 TMEM106AQ96A25 262 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PGLYRP3Q96LB9 341 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 FGF23Q9GZV9 251 aaPredicted RBP11.65□□□□□ -0.54
TUBB3-202ENST00000553656 OR51I2Q9H344 312 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 ZCCHC4Q9H5U6 513 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 CKLFQ9UBR5 152 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 LRCH1Q9Y2L9 728 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 PPIAL4AQ9Y536 164 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 LRRC42Q9Y546 428 aa11.65□□□□□ -0.54
TUBB3-202ENST00000553656 TRAV38-1A0A0B4J264 116 aa11.64□□□□□ -0.55
TUBB3-202ENST00000553656 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
TUBB3-202ENST00000553656 J3QT63 122 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms